Description
annmap provides annotation mappings for Affymetrix exon arrays and coordinate based queries to support deep sequencing data analysis. Database access is hidden behind the API which provides a set of functions such as genesInRange(), geneToExon(), exonDetails(), etc. Functions to plot gene architecture and BAM file data are also provided. Underlying data are from Ensembl.
| Date made available | 28 Sept 2021 |
|---|---|
| Publisher | University of Manchester Figshare |
Keywords
- annmap
- Affymetrix expression data
- deep sequencing data analysis
- Ensembl
- BAM files
- bioinformatics analyses
- CRUK MI
- Bioinformatics