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Bio-Health Informatics

  • School of Engineering
  • Department of Computer Science
  • Overview
  • Research output (130)
  • Projects (4)
  • Impacts (3)
  • Activities (32)
  • Datasets (7)
  • Prizes (1)

Research output

  • 75 Article
  • 32 Conference contribution
  • 8 Chapter
  • 7 Paper
  • More
    • 2 Poster
    • 2 Letter
    • 2 Preprint
    • 1 Commentary/debate
    • 1 Other contribution

Research output per year

Research output per year

  • A Blockchain-Based Dynamic Consent Architecture to Support Clinical Genomic Data Sharing (ConsentChain): Proof-of-Concept Study

    Albalwy, F., Brass, A. & Davies, A., 3 Nov 2021, In: JMIR medical informatics. 9, 11, e27816.

    Research output: Contribution to journal › Article › peer-review

    Open Access
  • A comparative study of methods for a priori prediction of MCQ difficulty

    Kurdi, G., Leo, J., Matentzoglu, N., Parsia, B., Sattler, U., Forge, S., Donato, G., Dowling, W. & Gromann, D., 2021, In: Semantic Web. 12, 3, p. 449-465 17 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
  • An explainable algorithm for detecting drug-induced QT-prolongation at risk of torsades de pointes (TdP) regardless of heart rate and T-wave morphology

    Alahmadi, A., Davies, A., Royle, J., Goodwin, L., Cresswell, K., Arain, Z., Vigo, M. & Jay, C., 1 Apr 2021, In: Computers in Biology and Medicine. 131, 104281.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File
    439 Downloads (Pure)
  • A Term-based and Citation Network-based Search System for COVID-19

    Zerva, C., Taylor, S., Soto, A., Nguyen, N. & Ananiadou, S., 18 Nov 2021, (Accepted/In press) In: JAMIA Open.

    Research output: Contribution to journal › Article › peer-review

  • Characterising Student Engagement Modes through Low-Level Activity Patterns

    Gledson, A., Apaolaza, A., Barthold, S., Günther, F., Yu, H. & Vigo, M., 8 Mar 2021, (Accepted/In press) 29th Conference on User Modeling, Adaptation and Personalization, UMAP 2021. Association for Computing Machinery

    Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

View all 130 research outputs

Projects

  • 1 Active
  • 3 Finished

Projects per year

  • DSH: NERC Digital Solutions Programme

    Kingston, R. (PI), Evans, J. (CoI), Lindley, S. (CoI), Ainsworth, J. (CoI), Brass, A. (CoI), Jay, C. (CoI), Coe, H. (CoI), Topping, D. (CoI) & Sharmina, M. (CoI)

    1/10/21 → 30/09/26

    Project: Research

  • Topol Fellowship Machine Learning Course

    Davies, A. (PI), Brass, A. (CoI), Davies, A. (CoI), Hooley, F. (CoI), Astley Theodossiadis, S. (CoI), Stivaros, S. (CoI), Bromiley, P. (CoI) & Eleftheriou, I. (CoI)

    13/09/21 → 13/12/21

    Project: Other

  • Digital Solutions Platforms and Toolkits

    Kingston, R. (PI), Ainsworth, J. (CoI), Brass, A. (CoI), Jay, C. (CoI), Sharmina, M. (CoI) & Topping, D. (CoI)

    10/08/20 → 9/01/21

    Project: Research

  • DARPA

    King, R. (PI), Ananiadou, S. (CoI) & Stevens, R. (CoI)

    15/07/14 → 14/01/19

    Project: Research

Impacts

  • Context aware text mining for the pharmaceutical sector

    Nenadic, G. (Participant) & Robertson, D. (Participant)

    Impact: Economic, Technological, Health and wellbeing

  • PRINTS and InterPro – online resources that facilitate discovery of pharmaceutical and commercially relevant information in proteomic and genomic data-sets

    Attwood, T. (Participant), Mitchell, A. (Participant), Mabey, J. (Participant), Croning , M. (Participant), Scordis, P. (Participant), Bradley, P. (Participant), Uddin, A. (Participant), Selley, J. (Participant), Maudling, N. (Participant), Moulton , G. (Participant), Gaulton, A. (Participant) & Wright, W. (Participant)

    Impact: Economic, Health and wellbeing, Technological

  • The Utopia Suite: realising semantic knowledge discovery and data linkage in the publishing and pharmaceutical industries

    Attwood, T. (Participant), Pettifer, S. (Participant), Sinnott, J. (Participant), Thorne, D. (Participant), Marsh, J. (Participant) & Mcdermott, P. (Participant)

    Impact: Technological, Economic

Activities

  • 19 Participating in a conference, workshop, exhibition, performance, inquiry, course etc
  • 7 Organising a conference, workshop, exhibition, performance, inquiry, course etc
  • 3 Invited talk
  • 2 Other
  • More
    • 1 Editorial work

Activities per year

  • H3ABioNet Scientific Advisory Board

    Attwood, T. (Other)

    2018 → 2022

    Activity: Internal positions, career professional development, other peer review and other › Other › Research

  • GOBLET Annual Meeting 2017 and satellite events

    Attwood, T. (Chair)

    21 Nov 2017

    Activity: Participating in or organising event(s) › Organising a conference, workshop, exhibition, performance, inquiry, course etc › Research

  • ELIXIR-UK Annual All-Hands Meeting

    Attwood, T. (Chair)

    1 Nov 2017

    Activity: Participating in or organising event(s) › Participating in a conference, workshop, exhibition, performance, inquiry, course etc › Research

  • NBIS Training workshop

    Attwood, T. (Chair)

    21 Sept 2017

    Activity: Participating in or organising event(s) › Organising a conference, workshop, exhibition, performance, inquiry, course etc › Research

  • ISMB/ECCB 2017

    Attwood, T. (Chair)

    21 Jul 2017

    Activity: Participating in or organising event(s) › Participating in a conference, workshop, exhibition, performance, inquiry, course etc › Research

View all 32 activities

Datasets

  • Modelling and extraction of variability in free-text medication prescriptions from an anonymised primary care electronic medical record research database

    Karystianis, G. (Contributor), Sheppard, T. (Contributor), Dixon, W. (Contributor) & Nenadic, G. (Contributor), figshare , 9 Feb 2016

    DOI: 10.6084/m9.figshare.c.3632789.v1, https://figshare.com/collections/Modelling_and_extraction_of_variability_in_free-text_medication_prescriptions_from_an_anonymised_primary_care_electronic_medical_record_research_database/3632789/1

    Dataset

  • The Proteasix Ontology

    Arguello Casteleiro, M. (Contributor), Klein, J. (Contributor) & Stevens, R. (Contributor), figshare , 4 Jun 2016

    DOI: 10.6084/m9.figshare.c.3622397.v1, https://figshare.com/collections/The_Proteasix_Ontology/3622397/1

    Dataset

  • MedNorm: A Corpus and Embeddings for Cross-terminology Medical Concept Normalisation

    Belousov, M. (Creator), Dixon, W. G. (Contributor) & Nenadic, G. (Contributor), Mendeley Data, 3 Jun 2019

    DOI: 10.17632/b9x7xxb9sz.1, https://data.mendeley.com/datasets/b9x7xxb9sz

    Dataset

  • Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature

    Arguello Casteleiro, M. (Contributor), Demetriou, G. (Contributor), Read, W. (Contributor), Fernandez Prieto, M. J. (Contributor), Maroto, N. (Contributor), Maseda Fernandez, D. (Contributor), Nenadic, G. (Contributor), Klein, J. (Contributor), Keane, J. (Contributor) & Stevens, R. (Contributor), figshare , 12 Apr 2018

    DOI: 10.6084/m9.figshare.c.4068524.v1, https://figshare.com/collections/Deep_learning_meets_ontologies_experiments_to_anchor_the_cardiovascular_disease_ontology_in_the_biomedical_literature/4068524/1

    Dataset

  • Presentation of laboratory test results in patient portals: influence of interface design on risk interpretation and visual search behaviour

    Fraccaro, P. (Creator), Vigo, M. (Creator), Balatsoukas, P. (Creator), Van Der Veer, S. (Creator), Hassan, L. (Creator), Williams, R. (Creator), Wood, G. (Creator), Sinha, S. (Creator), Buchan, I. (Creator) & Peek, N. (Creator), figshare , 12 Feb 2018

    DOI: 10.6084/m9.figshare.c.4003615

    Dataset

View all 7 datasets

Prizes

  • Best Paper Award at EICS 2017

    Apaolaza, A. (Recipient) & Vigo, M. (Recipient), Jun 2017

    Prize: Prize (including medals and awards)

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