Division of Informatics, Imaging & Data Sciences (L5)

Search results

• EnsemblUTA

  Freeman, P. (Creator), GitHub, 2019

  https://github.com/biocommons/uta/tree/master/misc/EnsemblUTA

  Dataset

• VariantFormatter

  Freeman, P. (Creator), GitHub, 2019

  https://github.com/openvar/variantFormatter

  Dataset

• VariantValidator

  Freeman, P. (Creator) & Forey, T. (Contributor), GitHub, 2018

  https://github.com/openvar/variantValidator

  Dataset

• VariantValidator REST API

  Freeman, P. (Creator), University of Leicester, 2018

  http://rest.variantvalidator.org

  Dataset

• variantvalidator.org

  Freeman, P. (Creator) & Dalgleish, R. (Other), University of Leicester, 2015

  https://variantvalidator.org/

  Dataset

• Quantitative assessment of placental morphology may identify specific causes of stillbirth

  Ptacek, I. (Contributor), Smith, A. (Contributor), Garrod, A. (Contributor), Bullough, S. (Contributor), Bradley, N. (Contributor), Batra, G. (Contributor), Sibley, C. (Contributor), Jones, R. (Contributor), Brownbill, P. (Contributor) & Heazell, A. (Contributor), figshare , 6 Feb 2016

  DOI: 10.6084/m9.figshare.c.3622058.v1, https://figshare.com/collections/Quantitative_assessment_of_placental_morphology_may_identify_specific_causes_of_stillbirth/3622058/1

  Dataset

• An external validation of models to predict the onset of chronic kidney disease using population-based electronic health records from Salford, UK

  Fraccaro, P. (Contributor), Van Der Veer, S. (Contributor), Brown, B. (Contributor), Prosperi, M. (Contributor), O'Donoghue, D. (Contributor), Collins, G. S. (Contributor), Buchan, I. (Contributor) & Peek, N. (Contributor), figshare , 12 Jul 2016

  DOI: 10.6084/m9.figshare.c.3597449.v1, https://figshare.com/collections/An_external_validation_of_models_to_predict_the_onset_of_chronic_kidney_disease_using_population-based_electronic_health_records_from_Salford_UK/3597449/1

  Dataset

• Tilting the lasso by knowledge-based post-processing

  Tharmaratnam, K. (Contributor), Sperrin, M. (Contributor), Jaki, T. (Contributor), Reppe, S. (Contributor) & Frigessi, A. (Contributor), figshare , 2 Sep 2016

  DOI: 10.6084/m9.figshare.c.3626198.v1, https://figshare.com/collections/Tilting_the_lasso_by_knowledge-based_post-processing/3626198/1

  Dataset

• blockchain-for-uav-networks

  Albalwy, F. (Creator), Mendeley Data, 23 Aug 2022

  DOI: 10.17632/m57pyrz8zb.2, https://data.mendeley.com/datasets/m57pyrz8zb

  Dataset

• The Future of Patient-Generated Data for UK Health Research

  Dixon, W. (Creator), Mcbeth, J. (Creator), Mackey, E. (Creator), Peek, N. (Creator), Van Der Veer, S. (Creator) & Ainsworth, J. (Creator), University of Manchester figshare, 27 Jun 2022

  DOI: 10.48420/20066132, https://figshare.manchester.ac.uk/articles/report/The_Future_of_Patient-Generated_Data_for_UK_Health_Research/20066132

  Dataset

• North v South England Mortality ONS 1965-2015

  Sperrin, M. (Contributor), Buchan, I. (Contributor) & Kontopantelis, E. (Contributor), Mendeley Data, 4 Jul 2017

  DOI: 10.17632/t85ryvz2p7.1, https://data.mendeley.com/datasets/t85ryvz2p7

  Dataset

• BGP: identifying gene-specific branching dynamics from single-cell data with a branching Gaussian process

  Boukouvalas, A. (Contributor), Hensman, J. (Contributor) & Rattray, M. (Contributor), figshare , 29 May 2018

  DOI: 10.6084/m9.figshare.c.4116494.v1, https://figshare.com/collections/BGP_identifying_gene-specific_branching_dynamics_from_single-cell_data_with_a_branching_Gaussian_process/4116494/1

  Dataset

• Plantar plate pathology is associated with erosive disease in the painful forefoot of patients with rheumatoid arthritis

  Siddle, H. J. (Contributor), Hodgson, R. (Contributor), Hensor, E. M. A. (Contributor), Grainger, A. J. (Contributor), Redmond, A. C. (Contributor), Wakefield, R. J. (Contributor) & Helliwell, P. S. (Contributor), figshare , 1 Jan 2017

  DOI: 10.6084/m9.figshare.c.3830005.v1, https://figshare.com/collections/Plantar_plate_pathology_is_associated_with_erosive_disease_in_the_painful_forefoot_of_patients_with_rheumatoid_arthritis/3830005/1

  Dataset

• Outcome-sensitive multiple imputation: a simulation study

  Kontopantelis, E. (Contributor), White, I. R. (Contributor), Sperrin, M. (Contributor) & Buchan, I. (Contributor), figshare , 9 Jan 2017

  DOI: 10.6084/m9.figshare.c.3661877.v1, https://figshare.com/collections/Outcome-sensitive_multiple_imputation_a_simulation_study/3661877/1

  Dataset

• Electronic audit and feedback intervention with action implementation toolbox to improve pain management in intensive care: protocol for a laboratory experiment and cluster randomised trial

  Wouter T Gude (Contributor), Roos-Blom, M. (Contributor), Van Der Veer, S. (Contributor), de Jonge, E. (Contributor), Peek, N. (Contributor), Dongelmans, D. A. (Contributor) & De Keizer, N. F. (Contributor), figshare , 25 May 2017

  DOI: 10.6084/m9.figshare.c.3788521.v1, https://figshare.com/collections/Electronic_audit_and_feedback_intervention_with_action_implementation_toolbox_to_improve_pain_management_in_intensive_care_protocol_for_a_laboratory_experiment_and_cluster_randomised_trial/3788521/1

  Dataset

• Monocarboxylate Transporter 1 (MCT1) is an independent prognostic biomarker in endometrial cancer

  Latif, A. (Contributor), Chadwick, A. (Contributor), Kitson, S. (Contributor), Gregson, H. (Contributor), Sivalingam, V. (Contributor), Bolton, J. (Contributor), McVey, R. J. (Contributor), Roberts, S. (Contributor), Marshall, K. (Contributor), Williams, K. (Contributor), Stratford, I. (Contributor) & Crosbie, E. (Contributor), figshare , 28 Dec 2017

  DOI: 10.6084/m9.figshare.c.3963363.v1, https://figshare.com/collections/Monocarboxylate_Transporter_1_MCT1_is_an_independent_prognostic_biomarker_in_endometrial_cancer/3963363/1

  Dataset

• A comparison of five methods of measuring mammographic density: a case-control study

  Astley, S. (Contributor), Harkness, E. (Contributor), Sergeant, J. (Contributor), Warwick, J. (Contributor), Stavrinos, P. (Contributor), Warren, R. (Contributor), Wilson, M. (Contributor), Beetles, U. (Contributor), Gadde, S. (Contributor), Lim, Y. (Contributor), Jain, A. (Contributor), Bundred, S. (Contributor), Barr, N. (Contributor), Reece, V. (Contributor), Brentnall, A. R. (Contributor), Cuzick, J. (Contributor), Howell, T. (Contributor) & Evans, D. (Contributor), figshare , 5 Feb 2018

  DOI: 10.6084/m9.figshare.c.3996891.v1, https://figshare.com/collections/A_comparison_of_five_methods_of_measuring_mammographic_density_a_case-control_study/3996891/1

  Dataset

• CCDC 1563191: Experimental Crystal Structure Determination

  Baldwin, A. (Contributor), Rivers-Auty, J. (Contributor), Daniels, M. (Contributor), White, C. (Contributor), Schwalbe, C. H. (Contributor), Schilling, T. (Contributor), Hammadi, H. (Contributor), Jaiyong, P. (Contributor), Spencer, N. G. (Contributor), England, H. (Contributor), Luheshi, N. M. (Contributor), Kadirvel, M. (Contributor), Lawrence, C. (Contributor), Rothwell, N. (Contributor), Harte, M. (Contributor), Bryce, R. (Contributor), Allan, S. M. (Contributor), Eder, C. (Contributor), Freeman, S. (Contributor) & Brough, D. (Contributor), Cambridge Crystallographic Data Centre, 1 Jan 2017

  DOI: 10.5517/ccdc.csd.cc1pgmj9, http://www.ccdc.cam.ac.uk/services/structure_request?id=doi:10.5517/ccdc.csd.cc1pgmj9&sid=DataCite

  Dataset

• CCDC 1563192: Experimental Crystal Structure Determination

  Baldwin, A. (Contributor), Rivers-Auty, J. (Contributor), Daniels, M. (Contributor), White, C. (Contributor), Schwalbe, C. H. (Contributor), Schilling, T. (Contributor), Hammadi, H. (Contributor), Jaiyong, P. (Contributor), Spencer, N. G. (Contributor), England, H. (Contributor), Luheshi, N. M. (Contributor), Kadirvel, M. (Contributor), Lawrence, C. (Contributor), Rothwell, N. (Contributor), Harte, M. (Contributor), Bryce, R. (Contributor), Allan, S. M. (Contributor), Eder, C. (Contributor), Freeman, S. (Contributor) & Brough, D. (Contributor), Cambridge Crystallographic Data Centre, 1 Jan 2017

  DOI: 10.5517/ccdc.csd.cc1pgmkb, http://www.ccdc.cam.ac.uk/services/structure_request?id=doi:10.5517/ccdc.csd.cc1pgmkb&sid=DataCite

  Dataset

• Supplementary Table 4: The Effect of Season of Birth on Brain Epigenome-Wide DNA Methylation of Older Adults

  Didikoglu, A. (Creator), Nair, N. (Creator), Robinson, A. (Creator), Roncaroli, F. (Creator), Pendleton, N. (Creator), Payton, A. (Creator) & Canal Corretger, M. M. (Creator), University of Manchester figshare, 27 May 2021

  DOI: 10.48420/14680281.v1, https://figshare.manchester.ac.uk/articles/dataset/Supplementary_Table_4_The_Effect_of_Season_of_Birth_on_Brain_Epigenome-Wide_DNA_Methylation_of_Older_Adults/14680281/1

  Dataset

• Segmentation of Multiple Tissue Types in Regenerating Wounds

  Robinson, C. (Creator), Kurinna, S. (Creator), Lindner, C. (Creator) & Cootes, T. (Creator), University of Manchester figshare, 9 Aug 2022

  DOI: 10.48420/19336868.v1, https://figshare.manchester.ac.uk/articles/poster/Segmentation_of_Multiple_Tissue_Types_in_Regenerating_Wounds/19336868/1

  Dataset

• Simplifying [18F]GE-179 PET: are both arterial blood sampling and 90-min acquisitions essential?

  McGinnity, C. J. (Contributor), Riaño Barros, D. A. (Contributor), Trigg, W. (Contributor), Brooks, D. J. (Contributor), Hinz, R. (Contributor), Duncan, J. S. (Contributor), Koepp, M. J. (Contributor) & Hammers, A. (Contributor), figshare , 11 Jun 2018

  DOI: 10.6084/m9.figshare.c.4130528.v1, https://figshare.com/collections/Simplifying_18F_GE-179_PET_are_both_arterial_blood_sampling_and_90-min_acquisitions_essential_/4130528/1

  Dataset

• SMASH evaluation dataset

  Peek, N. (Contributor), Mendeley Data, 11 Jul 2020

  DOI: 10.17632/ps8jwmmnkv.1, https://data.mendeley.com/datasets/ps8jwmmnkv

  Dataset

• CCDC 956662: Experimental Crystal Structure Determination

  Ellis, B. (Creator), Gorshkov, N. (Creator), Lumpov, A. A. (Creator), Miroslavov, A. E. (Creator), Yalfimov, A. N. (Creator), Gurzhiy, V. V. (Creator), Suglobov, D. N. (Creator), Braddock, R. (Creator), Adams, J. (Creator), Smith, A. (Creator), Prescott, M. C. (Creator) & Sharma, H. (Creator), Cambridge Crystallographic Data Centre, 20 Aug 2013

  DOI: 10.5517/ccdc.csd.cc113h2q

  Dataset

• A novel and fully automated mammographic texture analysis for risk prediction: results from two case-control studies

  Wang, C. (Contributor), Brentnall, A. (Contributor), Cuzick, J. (Contributor), Harkness, E. (Contributor), Evans, D. (Contributor) & Astley, S. (Contributor), figshare , 18 Oct 2017

  DOI: 10.6084/m9.figshare.c.3908383.v1, https://figshare.com/collections/A_novel_and_fully_automated_mammographic_texture_analysis_for_risk_prediction_results_from_two_case-control_studies/3908383/1

  Dataset