Personal profile

Opportunities

Postgraduate Opportunities

Carole has supervised 7 PhD's to completion and 7 MPhil candidates. She currently supervises 3 PhD students. 

Carole is looking for students with initiative who are able to develop an independent research agenda. She is particularly looking for students interested in the following areas:

- Novel methods for presenting complex provenance logs of workflows runs

- AI approaches to workflow sharing and reusing

- Mass curation of scientific protocols and workflows using AI

My group

Biography

Co-Director Manchester eScience Lab (founded since 2001), a multi-disciplinary group of scientific informaticians, computer science researchers and software engineers that focus on data intensive e-Science.

Joint Head of Node ELIXIR UK - 29 organisations (since 2016) - ELIXIR Europe, European Research Infrastructure for Life Science Data  -25 countries

Co-director Federated Analytics, Health Data Research UK  (since 2022)

Co-founder Software Sustainability Institute UK (since 2010)

Co-founder FAIRDOM Consortium for RDM in Life Science (since 2018)

Co-founder EVERSE European Virtual Institute for Research Software Excellence (since 2023)

Co-lead FAIR Computational Workflows WG International Workflows Community Initiative (since 2022)

Co-founder BioFAIR: A UK National Data and Method BioCommons (Chair RTAG Committee since 2025)

Director Digital Infrastructure IBISBA, European Research Infrastructure for Industrial Biotechnology and Biomanufacturing (2017-2024)

Node Director Open Middleware Infrastructure Institute UK (2006-2010)

Selected Current Committees:

  • UKRI Advisory Group for Digital Research Infrastructure (AGD) (UK)
  • G7 Open Science WG, UK appointed expert member
  • Schloss Dagstuhl – Leibniz Center for Informatics SAB (Germany)
  • Helmholtz Association Metadata Collaboration SAB (Germany)
  • Sage Bionetworks Board of Directors (USA)
  • National Dutch e-Science Center eSAC (Netherlands)

 

Awards and Fellowships:

  • Microsoft Research Jim Gray e-Science Award (2008);
  • Commander of the Order of the British Empire for services to science (2014)
  • The Carole Goble Medal for Outstanding Doctoral Paper in Computer Science, University of Manchester (awarded annually  since 2019)
  • Doctorem Honoris Causa, Data Science, Maastricht University (2018)
  • Microsoft Connect Vision Award (2013)
  • Fellow of the Royal Academy of Engineering (2010)
  • Fellow of the British Computing Society (2005)

Ranking

  • ScholarGPS Highly Ranked Scholar – Lifetime (62 Bioinformatics)
  • Research.com Computer Science Leader (2023,2024) -26th in UK
  • Deep Knowledge Analytics Top 100 AI Leaders in Drug Discovery and Advanced Healthcare (2019)

Research interests

Leader in Digital Research Infrastructures, translating technical innovations in distributed computing, semantic and metadata technologies, data and software sharing and computational workflows into FAIR and Open information solutions for scientists. 

Framed as "translational computer science" for Digital Research Infrastructure and Scholarly Communications, she is internationally recognised for her work on semantic web, metadata, ontologies, distributed computing and workflow management systems, and Virtual Research Environments for scientists. She collaborates with researchers world-wide, from many disciplines: Life Sciences, Biodiversity, Astronomy, Chemistry, Health informatics, Social Science and Digital Libraries.

A global leading advocate and thought leader for FAIR and Open Research; she is a co-author of the seminal paper on the FAIR principles for scientific data  and for FAIR Computational workflows.

She has pioneered work in semantically enabled middleware using FAIR Digital Objects, notably Bioschemas and RO-Crate. She currently runs open science global services WorkflowHub, ELIXIR-TeSS, FAIRDOM-SEEK, RDMkit and RSQKit. 

Carole is facinated by the social dynamics of how scientists and technologists work together to make and use Digital Research Infrastructure, and the cultural challenges for FAIR and Open Research. 

Notable pioneering results: 

  • First ontology driven integration platform for bioinformatics (TAMBIS - 1996) 
  • First open source computational workflow system for life science (Taverna - 2005)
  • First open source computional workflow sharing platform (myExperment - 2007)
  • First web service registry for life science services (BioCatalogue - 2007)
  • First ontology for bioinformatics (the myGrid ontology, 1996) 
  • Early Knowledge Graph technology for the pharmaceutical industry (open PHACTS - 2011)

 

Expertise related to UN Sustainable Development Goals

In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):

  • SDG 3 - Good Health and Well-being
  • SDG 4 - Quality Education
  • SDG 6 - Clean Water and Sanitation
  • SDG 7 - Affordable and Clean Energy
  • SDG 9 - Industry, Innovation, and Infrastructure
  • SDG 11 - Sustainable Cities and Communities
  • SDG 12 - Responsible Consumption and Production
  • SDG 14 - Life Below Water
  • SDG 15 - Life on Land
  • SDG 16 - Peace, Justice and Strong Institutions

External positions

Co-Director Federated Analytics, Health Data Research UK

2022 → …

Joint Head of Node, ELIXIR UK

2016 → …

Research Beacons, Institutes and Platforms

  • Digital Futures
  • Christabel Pankhurst Institute

Fingerprint

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Collaborations and top research areas from the last five years

Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
  • A terminology for scientific workflow systems

    Suter, F., Coleman, T., Altintaş, İ., Badia, R. M., Balis, B., Chard, K., Colonnelli, I., Deelman, E., Di Tommaso, P., Fahringer, T., Goble, C., Jha, S., Katz, D. S., Köster, J., Leser, U., Mehta, K., Oliver, H., Peterson, J.-L., Pizzi, G. & Pottier, L. & 6 others, Sirvent, R., Suchyta, E., Thain, D., Wilkinson, S. R., Wozniak, J. M. & Ferreira da Silva, R., 1 Jan 2026, In: Future Generation Computer Systems. 174, 107974.

    Research output: Contribution to journalArticlepeer-review

  • An Ecosystem of Services for FAIR Computational Workflows

    Wilkinson, S. R., Gustafsson, J., Bacall, F., Belhajjame, K., Capella, S., Gonzalez, J. M. F., Tande, J. F., Gadelha, L., Garijo, D., Grubel, P., Grüning, B., Khan, F. Z., Kanwal, S., Leo, S., Owen, S., Pireddu, L., Pouchard, L., Rodríguez-Navas, L., Serrano-Solano, B. & Soiland-Reyes, S. & 5 others, Vilne, B., Williams, A., Wouters, M. A., Coppens, F. & Goble, C., 21 May 2025, (Submitted) Workflow Systems for Scientific Data Analysis: (working title by FONDA). Deutsche Forschungsgemeinschaft (DFG)

    Research output: Chapter in Book/Conference proceedingChapter

    File
    4 Downloads (Pure)
  • Applying the FAIR Principles to Computational Workflows

    Wilkinson, S. R., Aloqalaa, M., Belhajjame, K., Crusoe, M. R., Kinoshita, B. D. P., Gadelha, L., Garijo, D., Gustafsson, O. J. R., Juty, N., Kanwal, S., Khan, F. Z., Köster, J., Gehlen, K.P.-V., Pouchard, L., Rannow, R. K., Soiland-Reyes, S., Soranzo, N., Sufi, S., Sun, Z. & Vilne, B. & 3 others, Wouters, M. A., Yuen, D. & Goble, C., 24 Feb 2025, In: Scientific Data. 12, 328.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    File
    62 Downloads (Pure)
  • A Terminology for Scientific Workflow Systems

    Suter, F., Coleman, T., Altintaş, İ., Badia, R. M., Balis, B., Chard, K., Colonnelli, I., Deelman, E., Tommaso, P. D., Fahringer, T., Goble, C., Jha, S., Katz, D. S., Köster, J., Leser, U., Mehta, K., Oliver, H., Peterson, J.-L., Pizzi, G. & Pottier, L. & 6 others, Sirvent, R., Suchyta, E., Thain, D., Wilkinson, S. R., Wozniak, J. M. & da Silva, R. F., 9 Jun 2025, (Submitted) arXiv.

    Research output: Preprint/Working paperPreprint

    File
    12 Downloads (Pure)
  • COVID-19: An exploration of consecutive systemic barriers to pathogen-related data sharing during a pandemic

    Yehudi, Y., Hughes-Noehrer, L., Goble, C. & Jay, C., 8 Jan 2025, In: Data & Policy. 7, e4.

    Research output: Contribution to journalArticlepeer-review

    Open Access