Personal profile
Biography
Joe received an MSci degree in chemistry with first-class honors from Imperial College, completing project work under Prof. Richard Templer on the phase changes of liquid crystals. He then continued his studies in the USA and was an awarded a PhD in chemistry from the University of Pennsylvania in 2008. His thesis explored the re-engineering of ferritin proteins to act as scaffolds for nanoparticle formation, work undertaken with the guidance of Prof. Ivan Dmochowski. Joe then stayed in Philadelphia to work with Prof. Dennis Discher, developing proteomic methods to study the nucleoskeletal lamin proteins and their roles in mechanotransduction. In 2014, he was awarded a BBSRC David Phillips Fellowship to develop his own program of research at the University of Manchester.
Research interests
Healthy cell behaviour is dependent on signaling from the cellular environment. Stem cells, for example, can interpret matrix stiffness queues in deciding whether to differentiate or remain quiescent. Cells in mature tissue must also be appropriately regulated to meet the mechanical demands of their surroundings, with cells in active tissue requiring more robust cellular structures in the cytoskeleton and nucleus. How cells receive and decipher mechanical inputs, by feeling the compliance of their surroundings or by being subject to deformation, is a key area of research in the field of mechanobiology. My laboratory is interested in how these physical inputs are transmitted from matrix to cell and how they are transduced into molecular signaling in the nucleus. We are also keen to understand how these pathways change during the ageing process, when our tissues stiffen and cellular capacity to repair and regenerate is diminished. These problems will be tackled using an unique ‘-omics’ toolkit for mechanobiology, allowing the study of protein regulation, changes in protein-protein interactions and mechanically-sensitive changes in protein conformation.
Research Beacons, Institutes and Platforms
- Manchester Regenerative Medicine Network
Accepting PhD students
- Accepting PhD students
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being
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Collaborations and top research areas from the last five years
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Bioactive peptide matrikines: discovery approaches for skin rejuvenation
Birtles, T., El-Houni, Z., Mistry, K., Ozols, M., Bradley, E. J., Bell, M., Swift, J., Sherratt, M. J. & Eckersley, A., 1 Apr 2026, In: American Journal of Physiology-Cell Physiology. 330, 4Research output: Contribution to journal › Article › peer-review
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Biomechanical and compositional basement membrane defects due to a Col4a1 mutation affect cardiac morphology and function
Boland, E., Hoyle, A., Robertson-Gray, O., Fuller, W., Swift, J., Cantini, M., Walker, M., Huethorst, E., Macdonald, E., Loughrey, C., Salmeron-Sanchez, M., Smith, G. L., Quondamatteo, F. & van Agtmael, T., 1 Nov 2025, In: Matrix Biology. 141, p. 82-100Research output: Contribution to journal › Article › peer-review
Open Access -
Collagen fibril formation at the plasma membrane occurs independently from collagen secretion [version 1; peer review: 1 approved, 1 approved with reservations]
Pickard, A., Garva, R., Antony, A., Calverley, B. C., Hoyle, A., Hayward, C. E., Spiller, D., Lu, Y., Hodson, N., Mandolfo, O., Kim, K., Bou-Gharios, G., Swift, J., Bigger, B., Kadler, K. E., Adamson, A., Brian, B., Brian, B., George, B.-G. & George, B.-G. & 24 others, , 29 Aug 2025, In: Wellcome open research.Research output: Contribution to journal › Article › peer-review
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Corrigendum to "Optimising a self-assembling peptide hydrogel as a Matrigel alternative for 3-dimensional mammary epithelial cell culture" [Biomater. Adv. volume 160, (2024) 213847]
Lingard, E., Dong, S., Hoyle, A., Appleton, E., Hales, A., Skaria, E., Lawless, C., Taylor-Hearn, I., Saadati, S., Chu, Q., Miller, A. F., Domingos, M., Saiani, A., Swift, J. & Gilmore, A. P., 1 Feb 2025, In: Biomaterials Advances. p. 214111Research output: Contribution to journal › Article › peer-review
Open Access -
Matrix stiffness drives alterations in aldehyde metabolism, inducing DNA damage and transformation
Jones, M., Percival, H., Hales, A., Wood, A., Sun, H., Tennant, F., Broadberry, E., Skaria, E., Barnes, H., Zindy, E., Lawless, C., Streuli, C., Swift, J., Brennan, K. & Gilmore, A., 9 Aug 2025, In: Scientific Reports. 15, 1, 29127 .Research output: Contribution to journal › Article › peer-review
Open Access
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Developing targeted strategies for precision breast cancer prevention
Gilmore, A. (PI), Astley Theodossiadis, S. (PI), Howell, S. (PI), Nagarajan, S. (PI), Brennan, K. (CoI), Evans, D. (CoI), Clarke, R. (CoI), Fergie, M. (CoI), Flaum, N. (CoI), Harrison, H. (CoI), Sherratt, M. (CoI), Swift, J. (CoI) & Zhou, H. (CoI)
1/05/25 → 30/04/28
Project: Research
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Laser capture dissection for spatially-resolved -omics analysis
Swift, J. (PI), Caswell, P. (CoI), Chang, J. (CoI), Clarke, R. (CoI), Couper, K. (CoI), Dyer, D. (CoI), Eckersley, A. (CoI), Gilmore, A. (CoI), Hadjidemetriou, M. (CoI), Hayes, A. (CoI), Hepworth, M. (CoI), Hussell, T. (CoI), Knight, D. (CoI), Kostarelos, K. (CoI), Lennon, R. (CoI), March, P. (CoI), Meng, Q.-J. (CoI), Menon, M. (CoI), Piper Hanley, K. (CoI), Reid, A. (CoI), Sharrocks, A. (CoI), Sherratt, M. (CoI), Thornton, D. (CoI), Unwin, R. (CoI), Wong, J. (CoI) & Woolner, S. (CoI)
1/07/24 → 28/02/25
Project: Research
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Multi-modal high throughput live cell system to track biomechanical properties, coupled with fluorescence imaging
Chang, J. (PI), Ballestrem, C. (CoI), Byron, A. (CoI), Cartmell, S. (CoI), Caswell, P. (CoI), Davis, J. R. (CoI), Gilmore, A. (CoI), Hodson, N. (CoI), Kimber, S. (CoI), March, P. (CoI), Piper Hanley, K. (CoI), Swift, J. (CoI) & Woolner, S. (CoI)
1/09/23 → 29/02/24
Project: Research
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High resolution cyclic ion mobility HDX mass spectrometry of protein dynamics and function
Politis, A. (PI), Baldock, C. (CoI), Barran, P. (CoI), Butterworth, S. (CoI), Dixon, N. (CoI), Francavilla, C. (CoI), Hollywood, K. (CoI), Hubbard, S. (CoI), Leys, D. (CoI), Lowe, M. (CoI), Pavitt, G. (CoI), Swift, J. (CoI), Tabernero, L. (CoI), Woodman, P. (CoI) & Pliotas, C. (CoI)
31/10/22 → 31/03/23
Project: Research
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Mechanisms of Mechanical Regulation of Stem Cell Fate.
Humphries, M. (PI), Humphries, J. (CoI) & Swift, J. (CoI)
1/12/20 → 30/11/23
Project: Research
Activities
- 2 Organising a conference, workshop, exhibition, performance, inquiry, course etc
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Get Connected 2017
Swift, J. (Member of programme committee)
2017Activity: Participating in or organising event(s) › Organising a conference, workshop, exhibition, performance, inquiry, course etc › Research
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Organisation of Cell-Matrix & Regen. Med. seminar series
Swift, J. (Organiser)
2016 → …Activity: Participating in or organising event(s) › Organising a conference, workshop, exhibition, performance, inquiry, course etc › Research
Datasets
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HSP90 inhibition in early-passage primary human mesenchymal stem cells subjected to 2 hour heat shock (4 donors)
Swift, J. (Creator), PRoteomics IDEntifications Database, 2021
https://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD027056
Dataset
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Serial mixture of peptides from mouse skin and primary human mesenchymal stem cells for protein quant methods benchmarking
Swift, J. (Creator), PRoteomics IDEntifications Database, 2020
https://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD012772
Dataset
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PNGase-F treated and untreated peptides from primary human mesenchymal stem cells for protein/PTM quant benchmarking
Swift, J. (Creator), PRoteomics IDEntifications Database, 2020
https://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD012782
Dataset
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Mouse skin technical replicate negative control
Swift, J. (Creator), PRoteomics IDEntifications Database, 2020
https://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD012784
Dataset
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MSCs on soft/stiff substrates treated with ROCK or myosin II inhibitors
Swift, J. (Creator), PRoteomics IDEntifications Database, 2022
https://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD013239
Dataset