Research output per year
Research output per year
Personal profile
Overview
My focus is bioinformatics, software engineering and data science; applying cutting edge software engineering, machine learning, statistical inference methodologies to answer complex biological questions. Work as a Honorary Research Associate in University of Manchester and Senior Bioinformatics data scientist at Wellome Sanger institute. Currently focussing on data analysis gathered by single cell genomic and proteomic methods to provide cutting edge insights in complex human genetics.
I have broad understanding in programming languages, computational biology, proteomics, genomics, regenerative medicine, ageing, software engineering, web-development, text mining, database development. Programming languages I use are: Python, Perl, R, Matlab, Java, Javascript, PHP, HTML5, SQL, Postgres and NoSQL integrating Machine Learning, Deep Learning (Keras, Tensorflow), and other cutting edge approaches such as text mining, web-scrapping and NLP. I have knowledge in full stack webdevelopment integrating ReactJs, Bootstrap, jQuerry, Docker, Nginx, Django, PHP, nodeJS (basic) and Android application development.
I also have experience working in wet lab with techniques such as HPLC, IHC, SDS-PAGE, Mass-Spectrometry, western blot, FT-IR spectroscopy and cell culture.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
Bachelor of Engineering, Medical Engineering, University of Bradford
Award Date: 31 Jul 2014
External positions
Senior Bioinformatics Data Scientist, Wellcome Trust Sanger Institute
11 Jan 2021 → …
Areas of expertise
- QA76 Computer software
- Software Development
- Bioinformatics
- Web Development
- Data Science
- machine learning
- Data Visualisation
- QH301 Biology
- Dermatology
- QD Chemistry
- Protein Biochemistry
Research Beacons, Institutes and Platforms
- Institute for Data Science and AI
- Manchester Regenerative Medicine Network
- Digital Futures
- Manchester Precision Medicine Institute
Keywords
- Bioinformatics
- Machine Learning
- Dermatology
- Artificial Inteligence
- Proteomics
- Biomedical Engineering
- Genomics
- Software Engineering
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Lung basement membranes are compositionally and structurally altered following resolution of acute inflammation.
Brand, O., Kirkham, S., Jagger, C., Ozols, M., Lennon, R., Hussell, T. & Eckersley, A., 19 Aug 2024, bioRxiv.Research output: Other contribution
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Oxidative DNA damage promotes vascular ageing associated with changes in extracellular matrix-regulating proteins
Foote, K., Rienks, M., Schmidt, L., Theofilatos, K., Yasmin, S., Ozols, M., Eckersley, A., Shah, A., Figg, N., Finigan, A., O'Shaughnessy, K., Wilkinson, I. B., Mayr, M. & Bennett, M., 1 Aug 2024, In: Cardiovascular research. cvae091.Research output: Contribution to journal › Article › peer-review
Open Access -
Prediction, screening and characterization of novel bioactive tetra-peptide matrikines for skin rejuvenation
Jariwala, N., Ozols, M., Eckersley, A., Mambwe, B., Watson, R. E. B., Zeef, L., Gilmore, A., Debelle, L., Bell, M., Bradley, E. J., Doush, Y., Keenan, A., Courage, C., Leroux, R., Peschard, O., Mondon, P., Ringenbach, C., Bernard, L., Pitois, A. & Sherratt, M. J., 22 Apr 2024, In: The British journal of dermatology.Research output: Contribution to journal › Article › peer-review
Open Access -
P13 Prediction and in vitro characterization of tetrapeptide matrikines with diverse effects on human dermal fibroblasts
Jariwala, N., Ozols, M., Eckersley, A., Watson, R., Mambwe, B., Gilmore, A., Debelle, L., Bell, M., Bradley, E., Doush, Y., Leroux, R., Peschard, O., Mondon, P., Ringenbach, C., Bernard, L., Pitois, A. & Sherratt, M., 7 Jul 2023, In: British Journal of Dermatology. 189, 1, p. E18-E19 2 p.Research output: Contribution to journal › Meeting Abstract › peer-review
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Peptide location fingerprinting identifies structural alterations within basement membrane components in ageing kidney
Eckersley, A. (Lead), Paiva Teixeira Morais, M., Ozols, M. & Lennon, R. (Corresponding), Aug 2023, In: Matrix Biology. 121, p. 167-178 12 p.Research output: Contribution to journal › Article › peer-review
Open Access
Projects
- 1 Finished
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Manchester Bioelectronics Network
Casson, A. (PI), Grieve, B. (PI), Ozanyan, K. (PI), Blanford, C. (PI), Cartmell, S. (PI), Li, Y. (PI), Ballestrem, C. (PI), Reid, A. (PI), Turner, M. (PI), Wong, L. S. (PI), Yeates, S. (PI), Trimble, E. (PI), Jones, C. (CoI), Scully, P. (CoI), Holmes, M. (CoI), Wimpenny, I. (CoI), Humphrey, B. (CoI), Turner, M. (CoI), Dobson, C. (CoI), Halsall, M. (CoI), Jones, S. (CoI), Echtermeyer, T. (CoI), Wijekoon, J. (CoI), Curry, R. (CoI), Picardo, M. (CoI), Tracey, K. (CoI), Persaud, K. (CoI), Migliorato, M. (CoI), Treves Brown, B. (CoI), Ozanyan, K. (CoI), Wright, P. (CoI), Majewski, L. (CoI), Hodgson, A. (CoI), Dudek, P. (CoI), Gaydecki, P. (CoI), Morgan, P. (CoI), Zhang, H. (CoI), Keavney, B. (CoI), Brenchley, P. (CoI), Fields, R. (CoI), Khan, U. (CoI), Casiraghi, C. (CoI), Blaker, J. (CoI), Saiani, A. (CoI), Vijayaraghavan, A. (CoI), Lu, J. (CoI), Kell, D. (CoI), Donald, A. (PGR student), Ozols, M. (CoI), Derby, B. (CoI), Sharma, J. (CoI), Mills, E. C. (CoI), Mohd Nawi, I. (PGR student), Tandon, B. (PGR student), Read, M. (CoI), Zhu, Q. (CoI), Ren, L. (CoI), Waigh, T. (CoI), Petersen, R. (CoI), Beach, C. (PGR student), Brown, T. (CoI), Thomas, A. (CoI) & Crowe, I. (CoI)
1/02/18 → 31/07/18
Project: Research