Personal profile
Biography
2022-2027 Wellcome Trust (WT) Investigator Awardee,
Professor of Developmental Neuroscience, Faculty of Life Sciences, Manchester, UK
2006-2022, Wellcome Trust Senior Research Fellow
Professor of Developmental Neuroscience, Faculty of Life Sciences, Manchester, UK
2000-2006, Wellcome Trust Senior Research Fellow
Wellcome Trust/Cancer Research UK Gurdon Institute, Cambridge, UK
1997-2000, Wellcome Trust Career Development Fellow
Wellcome Trust/Cancer Research UK Gurdon Institute, Cambridge, UK
1991-1996, Post-doctoral Fellow (HFSPO),
Laboratory of Molecular Neurobiology
The Salk Institute for Biomedical Research, La Jolla, USA.
Advisor: Prof. Chris Kintner
1986-1990, Ph.D., National Institute for Medical Research, London, UK.
Advisor: Prof. Robb Krumlauf
Research interests
During development, cells transition from a progenitor state to differentiation with defined timing, or to quiescence from which they may be reactivated. Understanding how such transitions and their timing are regulated is key in understanding how tissues are built, maintained, repaired or subverted in disease.
In recent years, our understanding of how cells make cell state transitions has been transformed by the application of single cell molecular technology that revealed a large degree of non-genetic heterogeneity in seemingly homogeneous populations of cells. In neural progenitors, single cell imaging with unstable reporters has revealed asynchronous pulsatile fluctuations in regulatory gene expression, which is masked by static measurements of population averages. Thus, cell fate transitions may not be driven simply by genes being turned on or off, but by a change in the dynamics of gene expression for example, from fluctuating or pulsatile expression to a more stable state.
Using single cell quantitative approaches, live imaging, multiple experimental model systems and mathematical modeling we have put forward the hypothesis that a mutually antagonistic interaction of a key neural progenitor transcription factor (TF) Hes1 and a microRNA, miR-9 is sufficient to generate pulsatile gene expression at the single cell level. This basic TF/miR regulatory network is capable of transitioning from pulsatile gene expression to a stable state autonomously and in a time-controlled manner. However, the timing can be “tuned” by external influences such as a change in parameters or the initial conditions. Finally, stochastic simulation of this TF/miR regulatory network led us to suggest that noise is beneficial in increasing progenitor robustness and spreading the time to differentiation. We have experience with working with multiple model systems, including Xenopus, zebrafish, Embryonic Stem cell and Neural Stem cell culture, quantitative approaches and molecular methods. We are particularly keen in conceptual integration of information coming from different fields.
Lab members
Dr. Veronica Biga, post-doc (Wellcome Trust funded)
Dr. Anzy Miller, post-doc (Wellcome Trust funded)
Dr. Andrew Rowntree, post-doc (CRUK funded)
Dr. Kunal Chopra, post-doc (CRUK funded)
Oliver Cottrell, MRC DTP PhD Student
Florence Woods, MRC DTP PhD Student
Mr Richard Fu, Wellcome Trust Clinical PhD student
Joshua Hawley, post-doc (Wellcome Trust funded)
Ben Noble, Technician (Wellcome Trust funded)
Robert Lea-shared Research Technician
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being
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Collaborations and top research areas from the last five years
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HES1 oscillations are required for cell cycle re-entry in oestrogen receptor positive breast cancer cells
Cottrell, O., Rowntree, A., Chopra, K., Mackellar, E., Noble, B., Dixon, H., Healy, C., Clarke, R. B. & Papalopulu, N., 10 Mar 2026, In: PNAS. 123, 10Research output: Contribution to journal › Article › peer-review
Open Access -
Cellular signalling protrusions enable dynamic distant contacts in spinal cord neurogenesis
Hawley, J., Lea, R., Biga, V., Papalopulu, N. & Manning, C., 15 Jan 2025, In: Biology Open. 14, 1, bio061765.Research output: Contribution to journal › Article › peer-review
Open Access -
Cell coupling compensates for changes in single-cell Her6 dynamics and provides phenotypic robustness
Doostdar, P., Hawley, J., Marinopoulou, E., Lea, R., Biga, V., Papalopulu, N. & Soto Rodriguez, X., 20 May 2024, In: Development. 151, 10, dev202640.Research output: Contribution to journal › Article › peer-review
Open Access -
Cellular signalling protrusions enable dynamic distant contacts in spinal cord neurogenesis
Hawley, J., Lea, R., Biga, V., Papalopulu, N. & Manning, C., 12 Oct 2024, bioRxiv, p. 1-11, 11 p.Research output: Preprint/Working paper › Preprint
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Identification of genes with oscillatory expression in glioblastoma: The paradigm of SOX2
Fu, R. Z., Cottrell, O., Cutillo, L., Rowntree, A., Zador, Z., Wurdak, H., Papalopulu, N. & Marinopoulou, E., 24 Jan 2024Research output: Other contribution › peer-review
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A quantitative and dynamical approach to understanding cell state transitions
Papalopulu, N. (PI)
1/04/22 → 31/03/27
Project: Research
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Centre for Biological Timing
Lucas, R. (PI), Bechtold, D. (PI), Fustin, J.-M. (PI), Ashe, H. (PI), Brown, T. (PI), Blaikley, J. (PI), Brass, A. (PI), Chandola, T. (PI), Durrington, H. (PI), Else, K. (PI), Hepworth, M. (PI), Hunter, L. (PI), Kadler, K. (PI), Kitchen, G. (PI), Loudon, A. (PI), Macdonald, A. (PI), Mcbeth, J. (PI), Milosavljevic, N. (PI), Rattray, M. (PI), Rutter, M. (PI), Sharrocks, A. (PI), Spiller, D. (PI), Storchi, R. (PI), Belle, M. (PI), Meng, Q.-J. (PI), Allen, A. (PI), Dixon, W. (PI), Gibbs, J. (PI), Hazel, A. (PI), Papalopulu, N. (PI), Ray, D. (PI), White, M. (PI), Chang, J. (PI), Bano Otalora, B. (CoI), Zavala, E. (PI), Orlowska-Feuer, P. (PI) & Didikoglu, A. (PI)
Project: Research
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Decoding Pulsing Proteins in the Pancreas.
Papalopulu, N. (PI) & Miller, A. (CoI)
1/10/18 → 31/12/22
Project: Research
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Wellcome Trust 4-Year PhD Programme in Quantitative and Biophysical Biology.
Papalopulu, N. (PI)
1/09/17 → 31/08/23
Project: Research
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Investigating molecular dynamics in quiescent stem cells
Papalopulu, N. (PI) & Marinopoulou, E. (CoI)
3/10/16 → 2/01/22
Project: Research