Research output per year
Research output per year
Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
Doctor rerum naturalium, A parameter estimation framework for kinetic models of biological systems, Martin-Luther University Halle Wittenberg
1 Jan 2009 → 17 Dec 2012
Award Date: 17 Dec 2012
Areas of expertise
- Q Science (General)
- Single cell RNA-seq
- Single cell ATAC-seq
- Single cell multiome
- Spatial Trnascriptomic
- Bioinformatics
Research Beacons, Institutes and Platforms
- Sustainable Futures
- Digital Futures
- Lydia Becker Institute
- Christabel Pankhurst Institute
Fingerprint
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Retinal determination network reactivation drives chemoresistance and blocks myeloid differentiation in acute myeloid leukemia
Clayfield, L., Malik, D., Whittle, J., Xu, J., Mével, R., Fadlullah, M., Patel, R., Szpakowska, M., Maqbool, M., Jones, M., Lie-A-Ling, M., Chevigne, A., Paggetti, J., Moussay, E., Baker, S. M., Iqbal, M., Maire, P., Somervaille, T., Ford, H. L. & Kouskoff, V. & 2 others, , 24 Feb 2026, In: Cell Reports. 45, 2, 116875.Research output: Contribution to journal › Article › peer-review
Open Access -
A cell atlas of the human outflow tract of the heart and its adult derivatives
Salmi-Leshem, R., Baker, S. M., Bamforth, S. D. & Bobola, N., 11 Sept 2025, eLife Sciences Publications, p. 1-29, 29 p.Research output: Preprint/Working paper › Preprint
Open Access -
CellPie: a scalable spatial transcriptomics factor discovery method via joint non-negative matrix factorization
Georgaka, S., Morgans, W., Baker, S. M., Zhao, Q., Sanchez Martinez, D., Ali, A., Bristow, R., Ghafoor, M., Iqbal, M. & Rattray, M., 11 Apr 2025, In: Nucleic acids research. 53, 6, gkaf251.Research output: Contribution to journal › Article › peer-review
Open Access -
Decoding the Spatial and Epigenetic Logic of Early Skin Development
Hammond, N. L., Baker, S. M., McGovern, A., Adamson, A., Sharrocks, A. D., Rattray, M., Dixon, J. & Dixon, M. J., 19 Sept 2025, bioRxiv, p. 1-38, 38 p.Research output: Preprint/Working paper › Preprint
Open Access -
Mgl2+ cDC2s coordinate fungal allergic airway type 2, but not type 17, inflammation in mice
Cook, P. C., Brown, S. L., Houlder, E. L., Furlong-Silva, J., Conn, D. P., Colombo, S. A. P., Baker, S., Svedberg, F. R., Howell, G., Bertuzzi, M., Boon, L., Konkel, J. E., Thornton, C. R., Allen, J. E. & MacDonald, A. S., 22 Jan 2025, In: Nature Communications. 16, 1, 928.Research output: Contribution to journal › Article › peer-review
Open Access
Activities
- 1 Participating in a conference, workshop, exhibition, performance, inquiry, course etc
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Exploring Bioinformatics in Clinical and Translational Research
Jakobsdottir, M. (Organiser), Kaya Akbuga, D. (Co-Organiser), Georgaka, S. (Co-Organiser), Bravo, R. (Co-Organiser), Baker, S. M. (Co-Organiser), Foster, F. (Co-Organiser) & Lin, L. (Co-Organiser)
24 Jun 2025Activity: Participating in or organising event(s) › Participating in a conference, workshop, exhibition, performance, inquiry, course etc › Teaching and Research
Equipment
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Genomic Technologies
Hayes, A. (Core Facility Lead), Smiga, M. (Technical Specialist), Morrisroe, C. (Technical Specialist), Holden, S. (Technical Specialist), Anderson, B. (Technical Specialist), Rash, B. (Senior Technician), Sharrocks, A. (Academic lead), Foster, F. (Other), Zeef, L. (Senior Technical Specialist), Donaldson, I. (Technical Specialist), Briggs, P. (Technical Specialist), Baker, S. M. (Other), Scholey, R. (Technical Specialist), Lin, I.-H. (Technical Specialist) & Zarrineh, P. (Technical Specialist)
FBMH Platform Sciences, Enabling Technologies & InfrastructureFacility/equipment: Facility