A toolkit for capturing and sharing FuGE experiments

Khalid Belhajjame; Andrew R. Jones; Norman W. Paton

doi:10.1093/bioinformatics/btn496

A toolkit for capturing and sharing FuGE experiments

Khalid Belhajjame, Andrew R. Jones, Norman W. Paton

Research output: Contribution to journal › Article › peer-review

Abstract

Motivation: The Functional Genomics Experiment Object Model (FuGE) supports modelling of experimental processes either directly or through extensions that specialize FuGE for use in specific contexts. FuGE applications commonly include components that capture, store and search experiment descriptions, where the requirements of different applications have much in common. Results: We describe a toolkit that supports data capture, storage and web-based search of FuGE experiment models; the toolkit can be used directly on FuGE compliant models or configured for use with FuGE extensions. The toolkit is illustrated using a FuGE extension standardized by the proteomics standards initiative, namely GelML. © The Author 2008. Published by Oxford University Press. All rights reserved.

Original language	English
Pages (from-to)	2647-2649
Number of pages	2
Journal	Bioinformatics
Volume	24
Issue number	22
DOIs	https://doi.org/10.1093/bioinformatics/btn496
Publication status	Published - Nov 2008

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author = "Khalid Belhajjame and Jones, {Andrew R.} and Paton, {Norman W.}",

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A toolkit for capturing and sharing FuGE experiments

Abstract

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