An architecture for visualisation and interactive analysis of proteins

Philip McDermott; James Sinnott; Dave Thorne; Steve Pettifer; Terri Attwood

doi:10.1109/CMV.2006.3

An architecture for visualisation and interactive analysis of proteins

Philip McDermott, James Sinnott, Dave Thorne, Steve Pettifer, Terri Attwood

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

Data sets in the biological domain are often semantically complex and difficult to integrate and visualise. Converting between the file formats required by interactive analysis tools and those used by the global databases is a costly and error prone process. This paper describes a data model designed to enable efficient rendering of and interaction with biological data, and two demonstrator applications from different fields of protein analysis that provide co-ordinated views of data held in the underlying model. © 2006 IEEE.

Original language	English
Title of host publication	Proceedings - Fourth International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006\|Proc. Fourth Int. Conf. Coordinated Multiple Views Explor. Visual.
Pages	55-65
Number of pages	10
Volume	2006
DOIs	https://doi.org/10.1109/CMV.2006.3
Publication status	Published - 2006
Event	4th International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006 - London Duration: 1 Jul 2006 → …

Conference

Conference	4th International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006
City	London
Period	1/07/06 → …

Keywords

Bioinformatics
Collaboration
Protein analysis
Representation
Visualization

Access to Document

10.1109/CMV.2006.3

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McDermott, P., Sinnott, J., Thorne, D., Pettifer, S., & Attwood, T. (2006). An architecture for visualisation and interactive analysis of proteins. In Proceedings - Fourth International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006|Proc. Fourth Int. Conf. Coordinated Multiple Views Explor. Visual. (Vol. 2006, pp. 55-65) https://doi.org/10.1109/CMV.2006.3

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title = "An architecture for visualisation and interactive analysis of proteins",

abstract = "Data sets in the biological domain are often semantically complex and difficult to integrate and visualise. Converting between the file formats required by interactive analysis tools and those used by the global databases is a costly and error prone process. This paper describes a data model designed to enable efficient rendering of and interaction with biological data, and two demonstrator applications from different fields of protein analysis that provide co-ordinated views of data held in the underlying model. {\textcopyright} 2006 IEEE.",

keywords = "Bioinformatics, Collaboration, Protein analysis, Representation, Visualization",

author = "Philip McDermott and James Sinnott and Dave Thorne and Steve Pettifer and Terri Attwood",

year = "2006",

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isbn = "0769526055",

volume = "2006",

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booktitle = "Proceedings - Fourth International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006|Proc. Fourth Int. Conf. Coordinated Multiple Views Explor. Visual.",

note = "4th International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006 ; Conference date: 01-07-2006",

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McDermott, P, Sinnott, J, Thorne, D, Pettifer, S & Attwood, T 2006, An architecture for visualisation and interactive analysis of proteins. in Proceedings - Fourth International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006|Proc. Fourth Int. Conf. Coordinated Multiple Views Explor. Visual.. vol. 2006, pp. 55-65, 4th International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006, London, 1/07/06. https://doi.org/10.1109/CMV.2006.3

An architecture for visualisation and interactive analysis of proteins. / McDermott, Philip; Sinnott, James; Thorne, Dave et al.
Proceedings - Fourth International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006|Proc. Fourth Int. Conf. Coordinated Multiple Views Explor. Visual.. Vol. 2006 2006. p. 55-65.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

TY - GEN

T1 - An architecture for visualisation and interactive analysis of proteins

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AU - Sinnott, James

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AU - Pettifer, Steve

AU - Attwood, Terri

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AB - Data sets in the biological domain are often semantically complex and difficult to integrate and visualise. Converting between the file formats required by interactive analysis tools and those used by the global databases is a costly and error prone process. This paper describes a data model designed to enable efficient rendering of and interaction with biological data, and two demonstrator applications from different fields of protein analysis that provide co-ordinated views of data held in the underlying model. © 2006 IEEE.

KW - Bioinformatics

KW - Collaboration

KW - Protein analysis

KW - Representation

KW - Visualization

U2 - 10.1109/CMV.2006.3

DO - 10.1109/CMV.2006.3

M3 - Conference contribution

SN - 0769526055

SN - 9780769526058

VL - 2006

SP - 55

EP - 65

BT - Proceedings - Fourth International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006|Proc. Fourth Int. Conf. Coordinated Multiple Views Explor. Visual.

T2 - 4th International Conference on Coordinated and Multiple Views in Exploratory Visualization, CMV 2006

Y2 - 1 July 2006

ER -

An architecture for visualisation and interactive analysis of proteins

Abstract

Conference

Keywords

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