Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt

Phillip Lord; Sean Bechhofer; Mark D. Wilkinson; Gary Schiltz; Damian Gessler; Duncan Hull; Carole Goble; Lincoln Stein

doi:10.1007/978-3-540-30475-3_25

Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt

Phillip Lord, Sean Bechhofer, Mark D. Wilkinson, Gary Schiltz, Damian Gessler, Duncan Hull, Carole Goble, Lincoln Stein

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

4 Downloads (Pure)

Abstract

We have seen an increasing amount of interest in the application of Semantic Web technologies to Web services. The aim is to support automated discovery and composition of the services allowing seamless and transparent interoperability. In this paper we discuss three projects that are applying such technologies to bioinformatics: myGrid, MOBY-Services and Semantic-MOBY. Through an examination of the differences and similarities between the solutions produced, we highlight some of the practical difficulties in developing Semantic Web services and suggest that the experiences with these projects have implications for the development of Semantic Web services as a whole.

Original language	English
Title of host publication	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)\|Lect. Notes Comput. Sci.
Publisher	Springer Nature
Pages	350-364
Number of pages	14
Volume	3298
ISBN (Electronic)	9783540304753
ISBN (Print)	9783540237983
DOIs	https://doi.org/10.1007/978-3-540-30475-3_25
Publication status	Published - Nov 2004
Event	The Semantic Web - ISWC 2004: Third International Semantic Web Conference,Hiroshima, Japan, November 7-11, 2004. Proceedings - Duration: 1 Jan 1824 → … http://dblp.uni-trier.de/db/conf/semweb/iswc2004.html#TsarkovRBH04http://dblp.uni-trier.de/rec/bibtex/conf/semweb/TsarkovRBH04.xmlhttp://dblp.uni-trier.de/rec/bibtex/conf/semweb/TsarkovRBH04

Publication series

Name	Lecture Notes in Computer Science

Conference

Conference	The Semantic Web - ISWC 2004: Third International Semantic Web Conference,Hiroshima, Japan, November 7-11, 2004. Proceedings
Period	1/01/24 → …
Internet address	http://dblp.uni-trier.de/db/conf/semweb/iswc2004.html#TsarkovRBH04http://dblp.uni-trier.de/rec/bibtex/conf/semweb/TsarkovRBH04.xmlhttp://dblp.uni-trier.de/rec/bibtex/conf/semweb/TsarkovRBH04

Keywords

Service provider
Service discover
Domain ontology
Service description
Service interface

Access to Document

10.1007/978-3-540-30475-3_25Licence: Unspecified

applying-semantic-web-services-to-bioinformatics-experiencesAccepted author manuscript, 142 KBLicence: CC BY

Cite this

Lord, P., Bechhofer, S., Wilkinson, M. D., Schiltz, G., Gessler, D., Hull, D., Goble, C., & Stein, L. (2004). Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci. (Vol. 3298, pp. 350-364). (Lecture Notes in Computer Science). Springer Nature. https://doi.org/10.1007/978-3-540-30475-3_25

Lord, Phillip ; Bechhofer, Sean ; Wilkinson, Mark D. et al. / Applying Semantic Web Services to Bioinformatics : Experiences Gained, Lessons Learnt. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Vol. 3298 Springer Nature, 2004. pp. 350-364 (Lecture Notes in Computer Science).

@inproceedings{50bef667e64844cdb94bbb92f74e5a8d,

title = "Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt",

abstract = "We have seen an increasing amount of interest in the application of Semantic Web technologies to Web services. The aim is to support automated discovery and composition of the services allowing seamless and transparent interoperability. In this paper we discuss three projects that are applying such technologies to bioinformatics: myGrid, MOBY-Services and Semantic-MOBY. Through an examination of the differences and similarities between the solutions produced, we highlight some of the practical difficulties in developing Semantic Web services and suggest that the experiences with these projects have implications for the development of Semantic Web services as a whole. ",

keywords = "Service provider, Service discover, Domain ontology, Service description, Service interface",

author = "Phillip Lord and Sean Bechhofer and Wilkinson, {Mark D.} and Gary Schiltz and Damian Gessler and Duncan Hull and Carole Goble and Lincoln Stein",

year = "2004",

month = nov,

doi = "10.1007/978-3-540-30475-3_25",

language = "English",

isbn = "9783540237983",

volume = "3298",

series = "Lecture Notes in Computer Science",

publisher = "Springer Nature",

pages = "350--364",

booktitle = "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.",

address = "United States",

note = "The Semantic Web - ISWC 2004: Third International Semantic Web Conference,Hiroshima, Japan, November 7-11, 2004. Proceedings ; Conference date: 01-01-1824",

url = "http://dblp.uni-trier.de/db/conf/semweb/iswc2004.html#TsarkovRBH04http://dblp.uni-trier.de/rec/bibtex/conf/semweb/TsarkovRBH04.xmlhttp://dblp.uni-trier.de/rec/bibtex/conf/semweb/TsarkovRBH04",

}

Lord, P, Bechhofer, S, Wilkinson, MD, Schiltz, G, Gessler, D, Hull, D, Goble, C & Stein, L 2004, Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt. in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. vol. 3298, Lecture Notes in Computer Science, Springer Nature, pp. 350-364, The Semantic Web - ISWC 2004: Third International Semantic Web Conference,Hiroshima, Japan, November 7-11, 2004. Proceedings, 1/01/24. https://doi.org/10.1007/978-3-540-30475-3_25

Applying Semantic Web Services to Bioinformatics : Experiences Gained, Lessons Learnt. / Lord, Phillip; Bechhofer, Sean; Wilkinson, Mark D. et al.

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Vol. 3298 Springer Nature, 2004. p. 350-364 (Lecture Notes in Computer Science).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

TY - GEN

T1 - Applying Semantic Web Services to Bioinformatics

T2 - The Semantic Web - ISWC 2004: Third International Semantic Web Conference,Hiroshima, Japan, November 7-11, 2004. Proceedings

AU - Lord, Phillip

AU - Bechhofer, Sean

AU - Wilkinson, Mark D.

AU - Schiltz, Gary

AU - Gessler, Damian

AU - Hull, Duncan

AU - Goble, Carole

AU - Stein, Lincoln

PY - 2004/11

Y1 - 2004/11

N2 - We have seen an increasing amount of interest in the application of Semantic Web technologies to Web services. The aim is to support automated discovery and composition of the services allowing seamless and transparent interoperability. In this paper we discuss three projects that are applying such technologies to bioinformatics: myGrid, MOBY-Services and Semantic-MOBY. Through an examination of the differences and similarities between the solutions produced, we highlight some of the practical difficulties in developing Semantic Web services and suggest that the experiences with these projects have implications for the development of Semantic Web services as a whole.

AB - We have seen an increasing amount of interest in the application of Semantic Web technologies to Web services. The aim is to support automated discovery and composition of the services allowing seamless and transparent interoperability. In this paper we discuss three projects that are applying such technologies to bioinformatics: myGrid, MOBY-Services and Semantic-MOBY. Through an examination of the differences and similarities between the solutions produced, we highlight some of the practical difficulties in developing Semantic Web services and suggest that the experiences with these projects have implications for the development of Semantic Web services as a whole.

KW - Service provider

KW - Service discover

KW - Domain ontology

KW - Service description

KW - Service interface

U2 - 10.1007/978-3-540-30475-3_25

DO - 10.1007/978-3-540-30475-3_25

M3 - Conference contribution

SN - 9783540237983

VL - 3298

T3 - Lecture Notes in Computer Science

SP - 350

EP - 364

BT - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.

PB - Springer Nature

Y2 - 1 January 1824

ER -

Lord P, Bechhofer S, Wilkinson MD, Schiltz G, Gessler D, Hull D et al. Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Vol. 3298. Springer Nature. 2004. p. 350-364. (Lecture Notes in Computer Science). doi: 10.1007/978-3-540-30475-3_25

Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt

Abstract

Publication series

Conference

Keywords

Access to Document

Fingerprint

Cite this