TY - GEN
T1 - Automatic Segmentation of Hip Osteophytes in DXA Scans using U-Nets
AU - Ebsim, Raja
AU - Faber, Ben
AU - Saunders, Fiona
AU - Frysz, Monika
AU - Gregory, Jennifer S.
AU - Harvey, Nicholas C.
AU - Tobias, Jonathan H
AU - Lindner, Claudia
AU - Cootes, Timothy
PY - 2022/9/16
Y1 - 2022/9/16
N2 - Osteophytes are distinctive radiographic features of osteo-arthritis (OA) in the form of small bone spurs protruding from joints that contribute significantly to symptoms. Identifying the genetic determinants of osteophytes would improve the understanding of their biological pathways and contributions to OA. To date, this has not been possible due to the costs and challenges associated with manually outlining osteophytes in sufficiently large datasets. Automatic systems that can segment osteophytes would pave the way for this research and also have potential clinical applications. We propose, to the best of our knowledge, the first work on automating pixel-wise segmentation of osteophytes in hip dual-energy x-ray absorptiometry scans (DXAs). Based on U-Nets, we developed an automatic system to detect and segment osteophytes at the superior and the inferior femoral head, and the lateral acetabulum. The system achieved sensitivity, specificity, and average Dice scores (±std) of (0.98, 0.92, 0.71 ± 0.19 ) for the superior femoral head [793 DXAs], (0.96, 0.85, 0.66 ± 0.24 ) for the inferior femoral head [409 DXAs], and (0.94, 0.73, 0.64 ± 0.24 ) for the lateral acetabulum [760 DXAs]. This work enables large-scale genetic analyses of the role of osteophytes in OA, and opens doors to using low-radiation DXAs for screening for radiographic hip OA.
AB - Osteophytes are distinctive radiographic features of osteo-arthritis (OA) in the form of small bone spurs protruding from joints that contribute significantly to symptoms. Identifying the genetic determinants of osteophytes would improve the understanding of their biological pathways and contributions to OA. To date, this has not been possible due to the costs and challenges associated with manually outlining osteophytes in sufficiently large datasets. Automatic systems that can segment osteophytes would pave the way for this research and also have potential clinical applications. We propose, to the best of our knowledge, the first work on automating pixel-wise segmentation of osteophytes in hip dual-energy x-ray absorptiometry scans (DXAs). Based on U-Nets, we developed an automatic system to detect and segment osteophytes at the superior and the inferior femoral head, and the lateral acetabulum. The system achieved sensitivity, specificity, and average Dice scores (±std) of (0.98, 0.92, 0.71 ± 0.19 ) for the superior femoral head [793 DXAs], (0.96, 0.85, 0.66 ± 0.24 ) for the inferior femoral head [409 DXAs], and (0.94, 0.73, 0.64 ± 0.24 ) for the lateral acetabulum [760 DXAs]. This work enables large-scale genetic analyses of the role of osteophytes in OA, and opens doors to using low-radiation DXAs for screening for radiographic hip OA.
KW - few-shot
KW - low-quality
KW - mri
KW - stroke lesion segmentation
KW - Osteophytes detection
KW - Automated osteoarthritis risk assessment
KW - U-Nets
KW - Osteophytes segmentation
KW - Computational anatomy
U2 - 10.1007/978-3-031-16443-9_1
DO - 10.1007/978-3-031-16443-9_1
M3 - Conference contribution
SN - 978-3-031-16442-2
VL - 13435
T3 - Medical Image Computing and Computer Assisted Intervention – MICCAI 2022. Lecture Notes in Computer Science
SP - 3
EP - 12
BT - Springer's Lecture Notes in Computer Science
A2 - Wang, Linwei
A2 - Dou, Qi
A2 - Fletcher, P Thomas
A2 - Speidel, Stefanie
A2 - Li, Shuo
ER -