TY - JOUR
T1 - Biopharmaceutics data management system for anonymised data sharing and curation
T2 - First application with orbito IMI project
AU - Lacy-Jones, Kristin
AU - Hayward, Philip
AU - Andrews, Steve
AU - Gledhill, Ian
AU - McAllister, Mark
AU - Abrahamsson, Bertil
AU - Rostami-Hodjegan, Amin
AU - Pepin, Xavier
PY - 2017/3/1
Y1 - 2017/3/1
N2 - The OrBiTo IMI project was designed to improve the understanding and modelling of how drugs are absorbed. To achieve this 13 pharmaceutical companies agreed to share biopharmaceutics drug properties and performance data, as long as they were able to hide certain aspects of their dataset if required. This data was then used in simulations to test how three in silico Physiological Based Pharmacokinetic (PBPK) tools performed. A unique database system was designed and implemented to store the drug data. The database system was unique, in that it had the ability to make different sections of a dataset visible or hidden depending on the stage of the project. Users were also given the option to hide identifying API attributes, to help prevent identification of project members from previously published data. This was achieved by applying blinding strategies to data parameters and the adoption of a unique numbering system. An anonymous communication tool was proposed to exchange comments about data, which enabled its curation and evolution. This paper describes the strategy adopted for numbering and blinding of the data, the tools developed to gather and search data as well as the tools used for communicating around the data with the aim of publicising the approach for other pre-competitive research between organisations.
AB - The OrBiTo IMI project was designed to improve the understanding and modelling of how drugs are absorbed. To achieve this 13 pharmaceutical companies agreed to share biopharmaceutics drug properties and performance data, as long as they were able to hide certain aspects of their dataset if required. This data was then used in simulations to test how three in silico Physiological Based Pharmacokinetic (PBPK) tools performed. A unique database system was designed and implemented to store the drug data. The database system was unique, in that it had the ability to make different sections of a dataset visible or hidden depending on the stage of the project. Users were also given the option to hide identifying API attributes, to help prevent identification of project members from previously published data. This was achieved by applying blinding strategies to data parameters and the adoption of a unique numbering system. An anonymous communication tool was proposed to exchange comments about data, which enabled its curation and evolution. This paper describes the strategy adopted for numbering and blinding of the data, the tools developed to gather and search data as well as the tools used for communicating around the data with the aim of publicising the approach for other pre-competitive research between organisations.
KW - Anonymised data sharing
KW - Data management system
KW - Database
KW - PBPK modelling
KW - Precompetitive research
UR - http://www.scopus.com/inward/record.url?scp=85006968041&partnerID=8YFLogxK
U2 - 10.1016/j.cmpb.2016.11.006
DO - 10.1016/j.cmpb.2016.11.006
M3 - Article
AN - SCOPUS:85006968041
SN - 0169-2607
VL - 140
SP - 29
EP - 44
JO - Computer Methods and Programs in Biomedicine
JF - Computer Methods and Programs in Biomedicine
ER -