Bioschemas: From Potato Salad to Protein Annotation

Alasdair J G Gray; Carole Goble; Rafael C. Jimenez

Bioschemas: From Potato Salad to Protein Annotation

Alasdair J G Gray, Carole Goble, Rafael C. Jimenez

Information Management

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

101 Downloads (Pure)

Abstract

The life sciences have a wealth of data resources with a wide range of overlapping content. Key repositories, such as UniProt for protein data or Entrez Gene for gene data, are well known and their content easily discovered through search engines. However, there is a long-tail of bespoke datasets with important content that are not so prominent in search results. Building on the success of Schema.org for making a wide range of structured web content more discoverable and interpretable, e.g. food recipes, the Bioschemas community aim to make life sciences datasets more findable by encouraging data providers to embed Schema.org markup in their resources.

Original language	English
Title of host publication	ISWC 2017 Posters & Demonstrations and Industry Tracks
Subtitle of host publication	Proceedings of the ISWC 2017 Posters & Demonstrations and Industry Tracks co-located with 16th International Semantic Web Conference (ISWC 2017)
Editors	Nadeschda Nikitina, Dezhao Song, Achille Fokoue, Peter Haase
Place of Publication	ceur-ws.org
Publisher	RWTH Aachen University
Edition	urn:nbn:de:0074-1963-7
Publication status	Published - 22 Oct 2017
Event	The 16th International Semantic Web Conference 2017 - Messe Wien, Vienna, Austria Duration: 21 Oct 2018 → 25 Oct 2018 Conference number: 16 https://iswc2017.semanticweb.org/calls/call-for-research-track-papers/

Publication series

Name	CEUR workshop proceedings
Publisher	ceur-ws.org
Volume	1963
ISSN (Electronic)	1613-0073

Conference

Conference	The 16th International Semantic Web Conference 2017
Abbreviated title	ISWC 2017
Country/Territory	Austria
City	Vienna
Period	21/10/18 → 25/10/18
Internet address	https://iswc2017.semanticweb.org/calls/call-for-research-track-papers/

Keywords

schema.org
metadata
dataset descriptions
data discovery

Access to Document

paper579Final published version, 945 KBLicence: CC BY

http://ceur-ws.org/Vol-1963/paper579.pdfLicence: Unspecified

1 Article
1 Web publication/site

Implementing FAIR Digital Objects in the EOSC-Life Workflow Collaboratory
Goble, C., Soiland-Reyes, S., Bacall, F., Owen, S., Williams, A., Eguinoa, I., Droesbeke, B., Leo, S., Pireddu, L., Rodríguez-Navas, L., Fernández, J. M., Capella-Gutierrez, S., Ménager, H., Grüning, B., Serrano-Solano, B., Ewels, P. & Coppens, F., 1 Mar 2021, In: Zenodo.
Research output: Contribution to journal › Article

Open Access
Bioschemas
Goble, C. (Other), Gray, A. J. G., Williams, A. (Curator), Soiland-Reyes, S. (Co-curator), Juty, N. (Co-curator), Nenadic, A. (Co-curator) & Owen, S. (Co-curator), 23 Feb 2016
Research output: Non-textual form › Web publication/site

Open Access

Cite this

Gray, A. J. G., Goble, C., & Jimenez, R. C. (2017). Bioschemas: From Potato Salad to Protein Annotation. In N. Nikitina, D. Song, A. Fokoue, & P. Haase (Eds.), ISWC 2017 Posters & Demonstrations and Industry Tracks: Proceedings of the ISWC 2017 Posters & Demonstrations and Industry Tracks co-located with 16th International Semantic Web Conference (ISWC 2017) (urn:nbn:de:0074-1963-7 ed.). (CEUR workshop proceedings; Vol. 1963). RWTH Aachen University. http://ceur-ws.org/Vol-1963/paper579.pdf

Gray, Alasdair J G ; Goble, Carole ; Jimenez, Rafael C. / Bioschemas: From Potato Salad to Protein Annotation. ISWC 2017 Posters & Demonstrations and Industry Tracks: Proceedings of the ISWC 2017 Posters & Demonstrations and Industry Tracks co-located with 16th International Semantic Web Conference (ISWC 2017). editor / Nadeschda Nikitina ; Dezhao Song ; Achille Fokoue ; Peter Haase. urn:nbn:de:0074-1963-7. ed. ceur-ws.org : RWTH Aachen University, 2017. (CEUR workshop proceedings).

@inproceedings{e1b48a7e837b420c9f2626117e127e8e,

title = "Bioschemas: From Potato Salad to Protein Annotation",

abstract = "The life sciences have a wealth of data resources with a wide range of overlapping content. Key repositories, such as UniProt for protein data or Entrez Gene for gene data, are well known and their content easily discovered through search engines. However, there is a long-tail of bespoke datasets with important content that are not so prominent in search results. Building on the success of Schema.org for making a wide range of structured web content more discoverable and interpretable, e.g. food recipes, the Bioschemas community aim to make life sciences datasets more findable by encouraging data providers to embed Schema.org markup in their resources.",

keywords = "schema.org, metadata, dataset descriptions, data discovery",

author = "Gray, {Alasdair J G} and Carole Goble and Jimenez, {Rafael C.}",

year = "2017",

month = oct,

day = "22",

language = "English",

series = "CEUR workshop proceedings",

publisher = "RWTH Aachen University",

editor = "Nadeschda Nikitina and Dezhao Song and Fokoue, {Achille } and Haase, { Peter}",

booktitle = "ISWC 2017 Posters & Demonstrations and Industry Tracks",

address = "Germany",

edition = "urn:nbn:de:0074-1963-7",

note = "The 16th International Semantic Web Conference 2017, ISWC 2017 ; Conference date: 21-10-2018 Through 25-10-2018",

url = "https://iswc2017.semanticweb.org/calls/call-for-research-track-papers/",

}

Gray, AJG, Goble, C & Jimenez, RC 2017, Bioschemas: From Potato Salad to Protein Annotation. in N Nikitina, D Song, A Fokoue & P Haase (eds), ISWC 2017 Posters & Demonstrations and Industry Tracks: Proceedings of the ISWC 2017 Posters & Demonstrations and Industry Tracks co-located with 16th International Semantic Web Conference (ISWC 2017). urn:nbn:de:0074-1963-7 edn, CEUR workshop proceedings, vol. 1963, RWTH Aachen University, ceur-ws.org, The 16th International Semantic Web Conference 2017, Vienna, Austria, 21/10/18. <http://ceur-ws.org/Vol-1963/paper579.pdf>

Bioschemas: From Potato Salad to Protein Annotation. / Gray, Alasdair J G; Goble, Carole; Jimenez, Rafael C.
ISWC 2017 Posters & Demonstrations and Industry Tracks: Proceedings of the ISWC 2017 Posters & Demonstrations and Industry Tracks co-located with 16th International Semantic Web Conference (ISWC 2017). ed. / Nadeschda Nikitina; Dezhao Song; Achille Fokoue; Peter Haase. urn:nbn:de:0074-1963-7. ed. ceur-ws.org: RWTH Aachen University, 2017. (CEUR workshop proceedings; Vol. 1963).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - Bioschemas: From Potato Salad to Protein Annotation

AU - Gray, Alasdair J G

AU - Goble, Carole

AU - Jimenez, Rafael C.

N1 - Conference code: 16

PY - 2017/10/22

Y1 - 2017/10/22

N2 - The life sciences have a wealth of data resources with a wide range of overlapping content. Key repositories, such as UniProt for protein data or Entrez Gene for gene data, are well known and their content easily discovered through search engines. However, there is a long-tail of bespoke datasets with important content that are not so prominent in search results. Building on the success of Schema.org for making a wide range of structured web content more discoverable and interpretable, e.g. food recipes, the Bioschemas community aim to make life sciences datasets more findable by encouraging data providers to embed Schema.org markup in their resources.

AB - The life sciences have a wealth of data resources with a wide range of overlapping content. Key repositories, such as UniProt for protein data or Entrez Gene for gene data, are well known and their content easily discovered through search engines. However, there is a long-tail of bespoke datasets with important content that are not so prominent in search results. Building on the success of Schema.org for making a wide range of structured web content more discoverable and interpretable, e.g. food recipes, the Bioschemas community aim to make life sciences datasets more findable by encouraging data providers to embed Schema.org markup in their resources.

KW - schema.org

KW - metadata

KW - dataset descriptions

KW - data discovery

M3 - Conference contribution

T3 - CEUR workshop proceedings

BT - ISWC 2017 Posters & Demonstrations and Industry Tracks

A2 - Nikitina, Nadeschda

A2 - Song, Dezhao

A2 - Fokoue, Achille

A2 - Haase, Peter

PB - RWTH Aachen University

CY - ceur-ws.org

T2 - The 16th International Semantic Web Conference 2017

Y2 - 21 October 2018 through 25 October 2018

ER -

Gray AJG, Goble C, Jimenez RC. Bioschemas: From Potato Salad to Protein Annotation. In Nikitina N, Song D, Fokoue A, Haase P, editors, ISWC 2017 Posters & Demonstrations and Industry Tracks: Proceedings of the ISWC 2017 Posters & Demonstrations and Industry Tracks co-located with 16th International Semantic Web Conference (ISWC 2017). urn:nbn:de:0074-1963-7 ed. ceur-ws.org: RWTH Aachen University. 2017. (CEUR workshop proceedings).

Bioschemas: From Potato Salad to Protein Annotation

Abstract

Publication series

Conference

Keywords

Access to Document

Fingerprint

Research output

Implementing FAIR Digital Objects in the EOSC-Life Workflow Collaboratory

Bioschemas

Cite this