COSTA: A Multi-center TOF-MRA Dataset and A Style Self-Consistency Network for Cerebrovascular Segmentation

Lei Mou, Qifeng Yan, Jinghui Lin, Yifan Zhao, Yonghuai Liu, Shaodong Ma, Jiong Zhang, Wenhao Lv, Tao Zhou, Alejandro F Frangi, Yitian Zhao

Research output: Contribution to journalArticlepeer-review

Abstract

Time-of-flight magnetic resonance angiography (TOF-MRA) is the least invasive and ionizing radiation-free approach for cerebrovascular imaging, but variations in imaging artifacts across different clinical centers and imaging vendors result in inter-site and inter-vendor heterogeneity, making its accurate and robust cerebrovascular segmentation challenging. Moreover, the limited availability and quality of annotated data pose further challenges for segmentation methods to generalize well to unseen datasets. In this paper, we construct the largest and most diverse TOF-MRA dataset (COSTA) from 8 individual imaging centers, with all the volumes manually annotated. Then we propose a novel network for cerebrovascular segmentation, namely CESAR, with the ability to tackle feature granularity and image style heterogeneity issues. Specifically, a coarse-to-fine architecture is implemented to refine cerebrovascular segmentation in an iterative manner. An automatic feature selection module is proposed to selectively fuse global long-range dependencies and local contextual information of cerebrovascular structures. A style self-consistency loss is then introduced to explicitly align diverse styles of TOF-MRA images to a standardized one. Extensive experimental results on the COSTA dataset demonstrate the effectiveness of our CESAR network against state-of-the-art methods. We have made 6 subsets of COSTA with the source code online available, in order to promote relevant research in the community.

Original languageEnglish
JournalIEEE transactions on medical imaging
VolumePP
Early online date16 Jul 2024
DOIs
Publication statusE-pub ahead of print - 16 Jul 2024

Keywords

  • Annotations
  • Feature extraction
  • Hospitals
  • Image resolution
  • Image segmentation
  • Magnetic fields
  • Magnetic resonance imaging
  • Multi-center and multi-vector
  • TOF-MRA
  • cerebrovascular segmentation
  • heterogeneity
  • style self-consistency

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