TY - JOUR
T1 - Cumulative association of 22 genetic variants with seropositive rheumatoid arthritis risk
AU - Karlson, Elizabeth W.
AU - Chibnik, Lori B.
AU - Kraft, Peter
AU - Cui, Jing
AU - Keenan, Brendan T.
AU - Ding, Bo
AU - Raychaudhuri, Souyma
AU - Klareskog, Lars
AU - Alfredsson, Lars
AU - Plenge, Robert M.
N1 - CA49449, NCI NIH HHS, United StatesCA50385, NCI NIH HHS, United StatesCA67262, NCI NIH HHS, United StatesCA87969, NCI NIH HHS, United StatesK08 AR055688-01A1S1, NIAMS NIH HHS, United StatesK08 AR055688-03, NIAMS NIH HHS, United StatesK08 AR055688-04, NIAMS NIH HHS, United StatesK24 AR0524-01, NIAMS NIH HHS, United StatesK24 AR052403-06, NIAMS NIH HHS, United StatesP01 CA087969-11, NCI NIH HHS, United StatesP60 AR047782, NIAMS NIH HHS, United StatesP60 AR047782-090005, NIAMS NIH HHS, United StatesR01 AR049880-07, NIAMS NIH HHS, United StatesR01 AR049880-08, NIAMS NIH HHS, United StatesR01 AR056768-03, NIAMS NIH HHS, United StatesR01 AR057108, NIAMS NIH HHS, United StatesR01 AR057108-02, NIAMS NIH HHS, United StatesR01 AR49880, NIAMS NIH HHS, United StatesR01 CA049449-18, NCI NIH HHS, United StatesR01 CA050385-19, NCI NIH HHS, United StatesR01-AR056768, NIAMS NIH HHS, United StatesU01 CA067262-05, NCI NIH HHS, United States
PY - 2010/6
Y1 - 2010/6
N2 - Background: Recent discoveries of risk alleles have made it possible to define genetic risk profiles for patients with rheumatoid arthritis (RA). This study examined whether a cumulative score based on 22 validated genetic risk alleles for seropositive RA would identify high-risk, asymptomatic individuals who might benefit from preventive interventions. Methods: Eight human leucocyte antigen (HLA) alleles and 14 single-nucleotide polymorphisms representing 13 validated RA risk loci were genotyped among 289 white seropositive cases and 481 controls from the US Nurses' Health Studies (NHS) and 629 white cyclic-citrullinated peptide antibody-positive cases and 623 controls from the Swedish Epidemiologic Investigation of Rheumatoid Arthritis (EIRA). A weighted genetic risk score (GRS) was created, in which the weight for each risk allele is the log of the published odds ratio (OR). Logistic regression was used to study associations with incident RA. Area under the curve (AUC) statistics were compared from a clinicalonly model and clinical plus genetic model in each cohort. Results: Patients with GRS > 1.25 SD of the mean had a significantly higher OR of seropositive RA in both NHS (OR=2.9, 95%CI 1.8 to 4.6) and EIRA (OR 3.4, 95% CI 2.3 to 5.0) referent to the population average. In NHS, the AUC for a clinical model was 0.57 and for a clinical plus genetic model was 0.66, and in EIRA was 0.63 and 0.75, respectively. Conclusion: The combination of 22 risk alleles into a weighted GRS significantly stratifies individuals for RA risk beyond clinical risk factors alone. Given the low incidence of RA, the clinical utility of a weighted GRS is limited in the general population.
AB - Background: Recent discoveries of risk alleles have made it possible to define genetic risk profiles for patients with rheumatoid arthritis (RA). This study examined whether a cumulative score based on 22 validated genetic risk alleles for seropositive RA would identify high-risk, asymptomatic individuals who might benefit from preventive interventions. Methods: Eight human leucocyte antigen (HLA) alleles and 14 single-nucleotide polymorphisms representing 13 validated RA risk loci were genotyped among 289 white seropositive cases and 481 controls from the US Nurses' Health Studies (NHS) and 629 white cyclic-citrullinated peptide antibody-positive cases and 623 controls from the Swedish Epidemiologic Investigation of Rheumatoid Arthritis (EIRA). A weighted genetic risk score (GRS) was created, in which the weight for each risk allele is the log of the published odds ratio (OR). Logistic regression was used to study associations with incident RA. Area under the curve (AUC) statistics were compared from a clinicalonly model and clinical plus genetic model in each cohort. Results: Patients with GRS > 1.25 SD of the mean had a significantly higher OR of seropositive RA in both NHS (OR=2.9, 95%CI 1.8 to 4.6) and EIRA (OR 3.4, 95% CI 2.3 to 5.0) referent to the population average. In NHS, the AUC for a clinical model was 0.57 and for a clinical plus genetic model was 0.66, and in EIRA was 0.63 and 0.75, respectively. Conclusion: The combination of 22 risk alleles into a weighted GRS significantly stratifies individuals for RA risk beyond clinical risk factors alone. Given the low incidence of RA, the clinical utility of a weighted GRS is limited in the general population.
U2 - 10.1136/ard.2009.120170
DO - 10.1136/ard.2009.120170
M3 - Article
C2 - 20233754
SN - 0003-4967
VL - 69
SP - 1077
EP - 1085
JO - Annals of the rheumatic diseases
JF - Annals of the rheumatic diseases
IS - 6
ER -