Determination of cell dose-survival relationships from endpoint dilution assays

    Research output: Contribution to journalArticlepeer-review

    Abstract

    Methods for fitting radiation survival curves to data obtained from endpoint-dilution assays are described. It is shown that for functional forms such as the linear-quadratic model the problem can be recast as a generalized linear model (GLM) and the data fitted using standard software. For functional forms which are not capable of being linearized, such as the multitarget model, the direct maximum likelihood (DML) techniques of Thames et al. ((1986) can be used. Both these techniques produce exact maximum likelihood parameter estimates. Compared with the weighted least-squares (WLS) approach traditionally employed, these approaches avoid the need to approximate the binomial distribution of the number of negative wells by a normal distribution, and avoid the biases introduced by the need for arbitrary treatment of data points with 0 or 100% negative wells. The results of fittings using the novel GLM and DML approaches are compared with those obtained using the WLS method on a large series of datasets. For most datasets the WLS method performs well, compared with the exact method, but in a small number of cases the WLS predicted parameter estimates can be in error by as much as their estimated standard errors. A method for the use of a concurrent control to correct for interexperimental variation is outlined. The methods have been implemented in a Fortran computer program using the NAG subroutine library. © 1993 Informa UK Ltd All rights reserved: reproduction in whole or part not permitted.
    Original languageEnglish
    Pages (from-to)251-255
    Number of pages4
    JournalInternational Journal of Radiation Biology
    Volume64
    Issue number2
    DOIs
    Publication statusPublished - 1993

    Keywords

    • ASSAY
    • CANCER
    • Cell Survival
    • Colony-Forming Units Assay
    • England
    • linear quadratic model
    • linear-quadratic model
    • methods
    • Models,Biological
    • NUMBER
    • RADIATION
    • Radiation Dosage
    • radiation effects
    • Software
    • Support,Non-U.S.Gov't
    • SURVIVAL

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