Projects per year
Abstract
We introduce how the Galaxy research environment integrates with RO-Crate as an implementation of Findable Accessible Interoperable Reproducible Digital Objects (FAIR Digital Objects / FDO) and how using RO-Crate as an exchange mechanism of workflows and their execution history helps integrate Galaxy with the wider ecosystem of ELIXIR and the European Open Science Cloud (EOSC-Life) to enable FAIR and reproducible data analysis.
| Original language | English |
|---|---|
| Article number | e95164 |
| Journal | Research Ideas and Outcomes |
| Volume | 8 |
| DOIs | |
| Publication status | Published - 12 Oct 2022 |
| Event | First International Conference on FAIR Digital Objects: Turning the Internet into a meaningful data space - Naturalis Biodiversity Center, Leiden, Netherlands Duration: 26 Oct 2022 → 28 Oct 2022 Conference number: 1 https://www.fdo2022.org/ |
Keywords
- FAIR digital object
- workflow
- exchange format
- packaging format
- metadata description
- FAIR
- reproducible data analysis
Fingerprint
Dive into the research topics of 'Enhancing RDM in Galaxy by integrating RO-Crate'. Together they form a unique fingerprint.Projects
- 1 Finished
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EOSC-Life: Providing an open collaborative space for digital biology in Europe
Goble, C. (PI), Bacall, F. (Technical team), Owen, S. (Researcher), Soiland-Reyes, S. (Researcher) & Williams, A. (Researcher)
1/03/19 → 31/08/23
Project: Research
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BioHackEU22 Report: Enhancing Research Data Management in Galaxy and Data Stewardship Wizard by utilising RO-Crates
Eguinoa, I., Suchánek, M., Knaisl, V., Slifka, J., Geest, P. D., López, D., Gruning, B., Leo, S. & Soiland-Reyes, S., 1 Jul 2023, Open Science Framework, (BioHackrXiv).Research output: Preprint/Working paper › Preprint
Open Access -
Packaging research artefacts with RO-Crate
Soiland-Reyes, S., Sefton, P., Crosas, M., Castro, L. J., Coppens, F., Fernández, J. M., Garijo, D., Grüning, B., La Rosa, M., Leo, S., Ó Carragáin, E., Portier, M., Trisovic, A., RO-Crate Community, Groth, P. & Goble, C., 20 Jul 2022, In: Data Science. 5, 2, p. 97-138 42 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Implementing FAIR Digital Objects in the EOSC-Life Workflow Collaboratory
Goble, C., Soiland-Reyes, S., Bacall, F., Owen, S., Williams, A., Eguinoa, I., Droesbeke, B., Leo, S., Pireddu, L., Rodríguez-Navas, L., Fernández, J. M., Capella-Gutierrez, S., Ménager, H., Grüning, B., Serrano-Solano, B., Ewels, P. & Coppens, F., 1 Mar 2021, In: Zenodo.Research output: Contribution to journal › Article
Open Access