Flaws in foldamers: conformational uniformity and signal decay in achiral helical peptide oligomers

B A F Le Bailly, L Byrne, V Diemer, M Foroozandeh, G A Morris, J Clayden

    Research output: Contribution to journalArticlepeer-review

    Abstract

    Although foldamers, by definition, are extended molecular structures with a well-defined conformation, minor conformers must be populated at least to some extent in solution. We present a quantitative analysis of these minor conformers for a series of helical oligomers built from achiral but helicogenic alpha-amino acids. By measuring the chain length dependence or chain position dependence of NMR or CD quantities that measure screw-sense preference in a helical oligomer, we quantify values for the decay constant of a conformational signal as it passes through the molecular structure. This conformational signal is a perturbation of the racemic mixture of M and P helices that such oligomers typically adopt by the inclusion of an N or C terminal chiral inducer. We show that decay constants may be very low (
    Original languageEnglish
    Pages (from-to)2313-2322
    Number of pages10
    JournalChemical Science
    Volume6
    Issue number4
    DOIs
    Publication statusPublished - 2015

    Keywords

    • screw-sense preference
    • amino-acid residues
    • alpha-aminoisobutyric-acid
    • dmso/meod solvent system
    • dynamic nmr-spectroscopy
    • chain-length dependence
    • hydrogen/deuterium exchange
    • macromolecular helicity
    • linear oligopeptides
    • chiral peptides

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