TY - JOUR
T1 - Group-wise similarity registration of point sets using Student's t-mixture model for statistical shape models
AU - Ravikumar, Nishant
AU - Gooya, Ali
AU - Çimen, Serkan
AU - Frangi, Alejandro F.
AU - Taylor, Zeike A.
N1 - Funding Information:
This study was funded by the European Unions Seventh Framework Programme ( FP7 /2007 2013) as part of the project VPH-DARE@IT (grant agreement no. 601055 ), and by the Engineering and Physical Sciences Research Council through the OCEAN project (EP/M006328/1). The authors would like to thank Dr. Fabian Wenzel, Philips Research Laboratories, Hamburg, Germany, for providing access to their fully automated tool, to segment the hippocampi. The authors would also like to thank Mohsen Farzi, CISTIB, The University of Sheffield, UK, for providing access to the data set of segmented femoral heads.
Publisher Copyright:
© 2017 The Authors
PY - 2018/2
Y1 - 2018/2
N2 - A probabilistic group-wise similarity registration technique based on Student's t-mixture model (TMM) and a multi-resolution extension of the same (mr-TMM) are proposed in this study, to robustly align shapes and establish valid correspondences, for the purpose of training statistical shape models (SSMs). Shape analysis across large cohorts requires automatic generation of the requisite training sets. Automated segmentation and landmarking of medical images often result in shapes with varying proportions of outliers and consequently require a robust method of alignment and correspondence estimation. Both TMM and mrTMM are validated by comparison with state-of-the-art registration algorithms based on Gaussian mixture models (GMMs), using both synthetic and clinical data. Four clinical data sets are used for validation: (a) 2D femoral heads (K= 1000 samples generated from DXA images of healthy subjects); (b) control-hippocampi (K= 50 samples generated from T1-weighted magnetic resonance (MR) images of healthy subjects); (c) MCI-hippocampi (K= 28 samples generated from MR images of patients diagnosed with mild cognitive impairment); and (d) heart shapes comprising left and right ventricular endocardium and epicardium (K= 30 samples generated from short-axis MR images of: 10 healthy subjects, 10 patients diagnosed with pulmonary hypertension and 10 diagnosed with hypertrophic cardiomyopathy). The proposed methods significantly outperformed the state-of-the-art in terms of registration accuracy in the experiments involving synthetic data, with mrTMM offering significant improvement over TMM. With the clinical data, both methods performed comparably to the state-of-the-art for the hippocampi and heart data sets, which contained few outliers. They outperformed the state-of-the-art for the femur data set, containing large proportions of outliers, in terms of alignment accuracy, and the quality of SSMs trained, quantified in terms of generalization, compactness and specificity.
AB - A probabilistic group-wise similarity registration technique based on Student's t-mixture model (TMM) and a multi-resolution extension of the same (mr-TMM) are proposed in this study, to robustly align shapes and establish valid correspondences, for the purpose of training statistical shape models (SSMs). Shape analysis across large cohorts requires automatic generation of the requisite training sets. Automated segmentation and landmarking of medical images often result in shapes with varying proportions of outliers and consequently require a robust method of alignment and correspondence estimation. Both TMM and mrTMM are validated by comparison with state-of-the-art registration algorithms based on Gaussian mixture models (GMMs), using both synthetic and clinical data. Four clinical data sets are used for validation: (a) 2D femoral heads (K= 1000 samples generated from DXA images of healthy subjects); (b) control-hippocampi (K= 50 samples generated from T1-weighted magnetic resonance (MR) images of healthy subjects); (c) MCI-hippocampi (K= 28 samples generated from MR images of patients diagnosed with mild cognitive impairment); and (d) heart shapes comprising left and right ventricular endocardium and epicardium (K= 30 samples generated from short-axis MR images of: 10 healthy subjects, 10 patients diagnosed with pulmonary hypertension and 10 diagnosed with hypertrophic cardiomyopathy). The proposed methods significantly outperformed the state-of-the-art in terms of registration accuracy in the experiments involving synthetic data, with mrTMM offering significant improvement over TMM. With the clinical data, both methods performed comparably to the state-of-the-art for the hippocampi and heart data sets, which contained few outliers. They outperformed the state-of-the-art for the femur data set, containing large proportions of outliers, in terms of alignment accuracy, and the quality of SSMs trained, quantified in terms of generalization, compactness and specificity.
KW - Expectation-maximisation (EM)
KW - Group-wise point set registration
KW - Statistical shape models
KW - Student's t-mixture model
UR - http://www.scopus.com/inward/record.url?scp=85037986547&partnerID=8YFLogxK
U2 - 10.1016/j.media.2017.11.012
DO - 10.1016/j.media.2017.11.012
M3 - Article
C2 - 29248842
AN - SCOPUS:85037986547
SN - 1361-8415
VL - 44
SP - 156
EP - 176
JO - Medical Image Analysis
JF - Medical Image Analysis
ER -