Hydrogen tunnelling in enzyme-catalysed H-transfer reactions: Flavoprotein and quinoprotein systems

Michael J. Sutcliffe, Laura Masgrau, Anna Roujeinikova, Linus O. Johannissen, Parvinder Hothi, Jaswir Basran, Kara E. Ranaghan, Adrian J. Mulholland, David Leys, Nigel S. Scrutton

    Research output: Contribution to journalArticlepeer-review

    Abstract

    It is now widely accepted that enzyme-catalysed C-H bond breakage occurs by quantum mechanical tunnelling. This paradigm shift in the conceptual framework for these reactions away from semi-classical transition state theory (TST, i.e. including zero-point energy, but with no tunnelling correction) has been driven over the recent years by experimental studies of the temperature dependence of kinetic isotope effects (KIEs) for these reactions in a range of enzymes, including the tryptophan tryptophylquinone-dependent enzymes such as methylamine dehydrogenase and aromatic amine dehydrogenase, and the flavoenzymes such as morphinone reductase and pentaerythritol tetranitrate reductase, which produced observations that are also inconsistent with the simple Bell-correction model of tunnelling. However, these data - especially, the strong temperature dependence of reaction rates and the variable temperature dependence of KIEs - are consistent with other tunnelling models (termed full tunnelling models), in which protein and/or substrate fluctuations generate a configuration compatible with tunnelling. These models accommodate substrate/protein (environment) fluctuations required to attain a configuration with degenerate nuclear quantum states and, when necessary, motion required to increase the probability of tunnelling in these states. Furthermore, tunnelling mechanisms in enzymes are supported by atomistic computational studies performed within the framework of modern TST, which incorporates quantum nuclear effects. © 2006 The Royal Society.
    Original languageEnglish
    Pages (from-to)1375-1386
    Number of pages11
    JournalPhilosophical Transactions of the Royal Society B: Biological Sciences
    Volume361
    Issue number1472
    DOIs
    Publication statusPublished - 29 Aug 2006

    Keywords

    • Computational simulation
    • H-tunnelling
    • Kinetic isotope effect
    • Stopped-flow kinetics
    • Transition state theory

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