Hyperspectral X-ray CT Voxelized TV reconstruction of a single, iodine-stained lizard head sample

Ryan Warr, Evelina Ametova, Robert Cernik, Gemma Fardell, Stephan Handschuh, Jakob Sauer Jørgensen, EVANGELOS PAPOUTSELLIS, Edoardo Pasca, Philip Withers

Research output: Non-textual formData set/Database

Abstract

Dataset description These datasets are voxel based reconstructions of hyperspectral CT data using the Core Imaging Library (CIL). They are stored as NeXus files (derived from hdf5) which can be read in, visualised and manipulated using CIL. - PDHG_TV_1000_Sp_alpha_0.004.nxs Is the solution after 1000 iterations of PDHG with TV applied in the spatial domain. - PDHG_TV_1000_SpCh_alpha_0.003_beta_0.5.nxs Is the solution after 1000 iterations of PDHG with TV applied both in the spatial domain, and in the energy (channel) domain. Dataset intended use These datasets are used in the CIL training notebook: https://github.com/TomographicImaging/CIL-Demos/blob/main/examples/3_Multichannel/03_Hyperspectral_reconstruction.ipynb They can be imported using CIL, with the following code snippet: from cil.io import NEXUSDataReader reader = NEXUSDataReader(file_name='path/to/data/PDHG_TV_1000_Sp_alpha_0.004.nxs') data = reader.read()
Original languageUndefined
PublisherZenodo
DOIs
Publication statusPublished - 1 Nov 2019

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