Identifying biochemical reaction networks from heterogeneous datasets

Wei Pan, Ye Yuan*, Lennart Ljung, Jorge Goncalves, Guy Bart Stan

*Corresponding author for this work

Research output: Chapter in Book/Conference proceedingConference contributionpeer-review

Abstract

In this paper, we propose a new method to identify biochemical reaction networks (i.e. both reactions and kinetic parameters) from heterogeneous datasets. Such datasets can contain (a) data from several replicates of an experiment performed on a biological system; (b) data measured from a biochemical network subjected to different experimental conditions, for example, changes/perturbations in biological inductions, temperature, gene knock-out, gene over-expression, etc. Simultaneous integration of various datasets to perform system identification has the potential to avoid non-identifiability issues typically arising when only single datasets are used.

Original languageEnglish
Title of host publication54rd IEEE Conference on Decision and Control,CDC 2015
PublisherIEEE
Pages2525-2530
Number of pages6
ISBN (Electronic)9781479978861
DOIs
Publication statusPublished - 8 Feb 2015
Event54th IEEE Conference on Decision and Control, CDC 2015 - Osaka, Japan
Duration: 15 Dec 201518 Dec 2015

Publication series

NameProceedings of the IEEE Conference on Decision and Control
Volume54rd IEEE Conference on Decision and Control,CDC 2015
ISSN (Print)0743-1546
ISSN (Electronic)2576-2370

Conference

Conference54th IEEE Conference on Decision and Control, CDC 2015
Country/TerritoryJapan
CityOsaka
Period15/12/1518/12/15

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