Projects per year
Abstract
EOSC-Life has developed WorkflowHub as an inclusive workflow registry, agnostic to any Workflow Management System (WfMS). WorkflowHub aims to incorporate their workflows in partnership with the WfMS, to embed the registration of workflows in the community processes, e.g. based on pre-existing workflow repositories. The registry adopts common practices, e.g.use of GitHub repositories, and supports integration with the ecosystem of tool packages, assisted by registries (bio.tools, biocontainers), and services for testing and benchmarking workflows (OpenEBench, LifeMonitor).
Original language | English |
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Journal | Zenodo |
DOIs | |
Publication status | Published - 1 Mar 2021 |
Keywords
- WorkflowHub
- Computational Workflow
- repository
- FAIR Digital Object
- FAIR
Fingerprint
Dive into the research topics of 'Implementing FAIR Digital Objects in the EOSC-Life Workflow Collaboratory'. Together they form a unique fingerprint.Projects
- 2 Finished
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EOSC-Life: Providing an open collaborative space for digital biology in Europe
Goble, C., Bacall, F., Owen, S., Soiland-Reyes, S. & Williams, A.
1/03/19 → 31/08/23
Project: Research
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BioExcel-2 Centre of Excellence for Computational Biomolecular Research
Goble, C., Soiland-Reyes, S., Long, R., Lowe, D., Woolland, O. & Capes, G.
1/01/19 → 30/06/22
Project: Research
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Enhancing RDM in Galaxy by integrating RO-Crate
De Geest, P., Coppens, F., Soiland-reyes, S., Eguinoa, I. & Leo, S., 12 Oct 2022, In: Research Ideas and Outcomes. 8, e95164.Research output: Contribution to journal › Conference article › peer-review
Open Access -
Methods Included: Standardizing Computational Reuse and Portability with the Common Workflow Language
Crusoe, M. R., Abeln, S., Iosup, A., Amstutz, P., Chilton, J., Tijanić, N., Ménager, H., Soiland-Reyes, S., Gavrilović, B., Goble, C. A. & The CWL Community, 20 May 2022, In: Communications of the ACM. 65, 6, p. 54–63 10 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile59 Downloads (Pure) -
Packaging research artefacts with RO-Crate
Soiland-Reyes, S., Sefton, P., Crosas, M., Castro, L. J., Coppens, F., Fernández, J. M., Garijo, D., Grüning, B., La Rosa, M., Leo, S., Ó Carragáin, E., Portier, M., Trisovic, A., RO-Crate Community, Groth, P. & Goble, C., 20 Jul 2022, In: Data Science. 5, 2, p. 97-138 42 p.Research output: Contribution to journal › Article › peer-review
Open Access
Activities
- 1 Membership of network
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FAIR Digital Objects Forum (FDO) (External organisation)
Stian Soiland-Reyes (Member)
11 Dec 2019 → …Activity: Membership › Membership of network › Research