TY - JOUR
T1 - Liquid Biopsy for Patient Characterization in Cardiovascular Disease: Verification against Markers of Cytochrome P450 and P‐Glycoprotein Activities
AU - Achour, Brahim
AU - Gosselin, Pauline
AU - Terrier, Jean
AU - Gloor, Yvonne
AU - Al‐Majdoub, Zubida M.
AU - Polasek, Thomas M.
AU - Daali, Youssef
AU - Rostami‐Hodjegan, Amin
AU - Reny, Jean‐Luc
N1 - Funding Information:
This study was supported by the Centre for Applied Pharmacokinetic Research (CAPKR) consortium (Eli Lilly, Takeda, Genentech, AbbVie, Merck‐Serono, MSD, GSK, Servier, and Janssen).
Funding Information:
The authors thank Illumina (Cambridge, UK) for access to sequencing facilities. This study was supported by the Centre for Applied Pharmacokinetic Research (CAPKR) consortium (Eli Lilly, Takeda, Genentech, AbbVie, Merck-Serono, MSD, GSK, Servier, and Janssen).
Publisher Copyright:
© 2022 The Authors. Clinical Pharmacology & Therapeutics published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics.
PY - 2022/5/19
Y1 - 2022/5/19
N2 - Precision dosing strategies require accounting for between-patient variability in pharmacokinetics together with subsequent pharmacodynamic differences. Liquid biopsy is a valuable new approach to diagnose disease prior to the appearance of clinical signs and symptoms, potentially circumventing invasive tissue biopsies. However, the possibility of quantitative grading of biomarkers, as opposed to simply confirming their presence or absence, is relatively new. In this study, we aimed to verify expression measurements of cytochrome P450 (CYP) enzymes and the transporter P-glycoprotein (P-gp) in liquid biopsy against genotype and activity phenotype (assessed by the Geneva cocktail approach) in 30 acutely ill patients with cardiovascular disease in a hospital setting. After accounting for exosomal shedding, expression in liquid biopsy correlated with activity phenotype for CYP1A2, CYP2B6, CYP2C9, CYP3A, and P-gp (r = 0.44–0.70, P ≤ 0.05). Although genotype offered a degree of stratification, large variability (coefficient of variation (CV)) in activity (up to 157%) and expression in liquid biopsy (up to 117%) was observed within each genotype, indicating a mismatch between genotype and phenotype. Further, exosome screening revealed expression of 497 targets relevant to drug metabolism and disposition (159 enzymes and 336 transporters), as well as 20 molecular drug targets. Although there were no functional data available to correlate against these large-scale measurements, assessment of disease perturbation from healthy baseline was possible. Verification of liquid biopsy against activity phenotype is important to further individualize modeling approaches that aspire to achieve precision dosing from the start of drug treatment without the need for multiple rounds of dose optimization.
AB - Precision dosing strategies require accounting for between-patient variability in pharmacokinetics together with subsequent pharmacodynamic differences. Liquid biopsy is a valuable new approach to diagnose disease prior to the appearance of clinical signs and symptoms, potentially circumventing invasive tissue biopsies. However, the possibility of quantitative grading of biomarkers, as opposed to simply confirming their presence or absence, is relatively new. In this study, we aimed to verify expression measurements of cytochrome P450 (CYP) enzymes and the transporter P-glycoprotein (P-gp) in liquid biopsy against genotype and activity phenotype (assessed by the Geneva cocktail approach) in 30 acutely ill patients with cardiovascular disease in a hospital setting. After accounting for exosomal shedding, expression in liquid biopsy correlated with activity phenotype for CYP1A2, CYP2B6, CYP2C9, CYP3A, and P-gp (r = 0.44–0.70, P ≤ 0.05). Although genotype offered a degree of stratification, large variability (coefficient of variation (CV)) in activity (up to 157%) and expression in liquid biopsy (up to 117%) was observed within each genotype, indicating a mismatch between genotype and phenotype. Further, exosome screening revealed expression of 497 targets relevant to drug metabolism and disposition (159 enzymes and 336 transporters), as well as 20 molecular drug targets. Although there were no functional data available to correlate against these large-scale measurements, assessment of disease perturbation from healthy baseline was possible. Verification of liquid biopsy against activity phenotype is important to further individualize modeling approaches that aspire to achieve precision dosing from the start of drug treatment without the need for multiple rounds of dose optimization.
KW - ATP Binding Cassette Transporter, Subfamily B
KW - Biomarkers
KW - Cardiovascular Diseases/diagnosis
KW - Cytochrome P-450 CYP2C19/genetics
KW - Cytochrome P-450 CYP2C9/genetics
KW - Cytochrome P-450 CYP3A/metabolism
KW - Cytochrome P-450 Enzyme System/genetics
KW - Humans
KW - Liquid Biopsy
KW - Membrane Transport Proteins
U2 - 10.1002/cpt.2576
DO - 10.1002/cpt.2576
M3 - Article
C2 - 35262906
SN - 0009-9236
VL - 111
SP - 1268
EP - 1277
JO - Clinical Pharmacology & Therapeutics
JF - Clinical Pharmacology & Therapeutics
IS - 6
ER -