MetaNetter: Inference and visualization of high-resolution metabolomic networks

Fabien Jourdan; Rainer Breitling; Michael P. Barrett; David Gilbert

doi:10.1093/bioinformatics/btm536

MetaNetter: Inference and visualization of high-resolution metabolomic networks

Fabien Jourdan, Rainer Breitling, Michael P. Barrett, David Gilbert

Research output: Contribution to journal › Article › peer-review

Abstract

Summary: We present a Cytoscape plugin for the inference and visualization of networks from high-resolution mass spectrometry metabolomic data. The software also provides access to basic topological analysis. This open source, multi-platform software has been successfully used to interpret metabolomic experiments and will enable others using filtered, high mass accuracy mass spectrometric data sets to build and analyse networks. © The Author 2007. Published by Oxford University Press. All rights reserved.

Original language	English
Pages (from-to)	143-145
Number of pages	2
Journal	Bioinformatics
Volume	24
Issue number	1
DOIs	https://doi.org/10.1093/bioinformatics/btm536
Publication status	Published - 1 Jan 2008

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title = "MetaNetter: Inference and visualization of high-resolution metabolomic networks",

abstract = "Summary: We present a Cytoscape plugin for the inference and visualization of networks from high-resolution mass spectrometry metabolomic data. The software also provides access to basic topological analysis. This open source, multi-platform software has been successfully used to interpret metabolomic experiments and will enable others using filtered, high mass accuracy mass spectrometric data sets to build and analyse networks. {\textcopyright} The Author 2007. Published by Oxford University Press. All rights reserved.",

author = "Fabien Jourdan and Rainer Breitling and Barrett, {Michael P.} and David Gilbert",

year = "2008",

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doi = "10.1093/bioinformatics/btm536",

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AU - Breitling, Rainer

AU - Barrett, Michael P.

AU - Gilbert, David

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N2 - Summary: We present a Cytoscape plugin for the inference and visualization of networks from high-resolution mass spectrometry metabolomic data. The software also provides access to basic topological analysis. This open source, multi-platform software has been successfully used to interpret metabolomic experiments and will enable others using filtered, high mass accuracy mass spectrometric data sets to build and analyse networks. © The Author 2007. Published by Oxford University Press. All rights reserved.

AB - Summary: We present a Cytoscape plugin for the inference and visualization of networks from high-resolution mass spectrometry metabolomic data. The software also provides access to basic topological analysis. This open source, multi-platform software has been successfully used to interpret metabolomic experiments and will enable others using filtered, high mass accuracy mass spectrometric data sets to build and analyse networks. © The Author 2007. Published by Oxford University Press. All rights reserved.

U2 - 10.1093/bioinformatics/btm536

DO - 10.1093/bioinformatics/btm536

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EP - 145

JO - Bioinformatics

JF - Bioinformatics

IS - 1

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MetaNetter: Inference and visualization of high-resolution metabolomic networks

Abstract

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