Methods Included: Standardizing Computational Reuse and Portability with the Common Workflow Language

Michael R. Crusoe, Sanne Abeln, Alexandru Iosup, Peter Amstutz, John Chilton, Nebojša Tijanić, Hervé Ménager, Stian Soiland-Reyes, Bogdan Gavrilović, Carole A. Goble, The CWL Community (Collaborator)

Research output: Contribution to journalArticlepeer-review

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Search results

  • 2021

    Implementing FAIR Digital Objects in the EOSC-Life Workflow Collaboratory

    Goble, C., Soiland-Reyes, S., Bacall, F., Owen, S., Williams, A., Eguinoa, I., Droesbeke, B., Leo, S., Pireddu, L., Rodríguez-Navas, L., Fernández, J. M., Capella-Gutierrez, S., Ménager, H., Grüning, B., Serrano-Solano, B., Ewels, P. & Coppens, F., 1 Mar 2021, In: Zenodo.

    Research output: Contribution to journalArticle

    Open Access
  • 2018

    CWLProv - Interoperable Retrospective Provenance capture and its challenges

    Khan, F. Z., Soiland-Reyes, S., Crusoe, M. R., Lonie, A. & Sinnott, R., 27 Mar 2018, (Submitted). 14 p.

    Research output: Contribution to conferencePaperpeer-review

    File
    6 Downloads (Pure)
  • 2017

    common-workflow-language/cwltool

    Amstutz, P., Crusoe, M. R., Singh, M., Kumar, K., Chilton, J., [Unknown], B., Soiland-Reyes, S., Chapman, B., Kotliar, M., Leehr, D., Carrasco, G., Kartashov, A., Tijanic, N., Ménager, H., Safont, P. R., Porter, J. J., Molenaar, G., Yuen, D., Barrera, A., Ivkovic, S., & 10 othersSpangler, R., [Unknown], P., Tanjo, T., Vandewege, W., Randall, J. C., Kern, J., Bradley, J., Li, J., der Zwaan, J. V. & Connelly, A., 2017

    Research output: Non-textual formSoftware

    Open Access
  • CWL Viewer: The Common Workflow Language Viewer

    Robinson, M., Soiland-Reyes, S., Crusoe, M. R. & Goble, C., 6 Jul 2017. 1 p.

    Research output: Contribution to conferencePosterpeer-review

    Open Access
    File
    257 Downloads (Pure)
  • 2015

    Portable workflow and tool descriptions with the CWL

    Amstutz, P., Tijanić, N., Soiland-Reyes, S., Kern, J., Stojanovic, L., Pierce, T., Chilton, J., Mikheev, M., Lampa, S., Ménager, H., Frazer, S., Malladi, V. S. & Crusoe, M. R., 10 Jul 2015. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

    Open Access
    File
    94 Downloads (Pure)