Molecular architecture of the human sinus node insights into the function of the cardiac pacemaker

Natalie J. Chandler, Ian D. Greener, James O. Tellez, Shin Inada, Hanny Musa, Peter Molenaar, Dario DiFrancesco, Mirko Baruscotti, Renato Longhi, Robert H. Anderson, Rudolf Billeter, Vinod Sharma, Daniel C. Sigg, Mark R. Boyett, Halina Dobrzynski

Research output: Contribution to journalArticlepeer-review


BackgroundAlthough we know much about the molecular makeup of the sinus node (SN) in small mammals, little is known about it in humans. The aims of the present study were to investigate the expression of ion channels in the human SN and to use the data to predict electrical activity. Methods and ResultsQuantitative polymerase chain reaction, in situ hybridization, and immunofluorescence were used to analyze 6 human tissue samples. Messenger RNA (mRNA) for 120 ion channels (and some related proteins) was measured in the SN, a novel paranodal area, and the right atrium (RA). The results showed, for example, that in the SN compared with the RA, there was a lower expression of Nav1.5, Kv4.3, Kv1.5, ERG, Kir2.1, Kir6.2, RyR2, SERCA2a, Cx40, and Cx43 mRNAs but a higher expression of Cav1.3, Cav3.1, HCN1, and HCN4 mRNAs. The expression pattern of many ion channels in the paranodal area was intermediate between that of the SN and RA; however, compared with the SN and RA, the paranodal area showed greater expression of Kv4.2, Kir6.1, TASK1, SK2, and MiRP2. Expression of ion channel proteins was in agreement with expression of the corresponding mRNAs. The levels of mRNA in the SN, as a percentage of those in the RA, were used to estimate conductances of key ionic currents as a percentage of those in a mathematical model of human atrial action potential. The resulting SN model successfully produced pacemaking. ConclusionsIon channels show a complex and heterogeneous pattern of expression in the SN, paranodal area, and RA in humans, and the expression pattern is appropriate to explain pacemaking. © 2009 American Heart Association, Inc.
Original languageEnglish
Pages (from-to)1562-1575
Number of pages13
Issue number12
Publication statusPublished - 31 Mar 2009


  • action potentials
  • electrophysiology8genes8ion channels
  • Sinus node


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