Optimal Mutation Rate Control under Selection in Hamming Spaces

E. Aston, A. Channon, R. V. Belavkin, R. Krašovec, C. G. Knight

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    Abstract

    We investigate the effect of selection in a meta-genetic algo- rithm designed to optimize mutation rate control, based on the fitness of sequences relative to a defined optimum, in asexual evolution. Multiple innovations in the algorithm are required to achieve the evolution of optimal mutation rate control un- der selection. Before implementing selection, results from this improved algorithm clarify the optimal relationship of mutation rate to distance from the optimum as being a dou- ble sigmoid for binary sequences. Furthermore, the results clarify how such control functions depend on alphabet size, sequence length and the time horizon over which evolution is assessed. Incorporating selection leads to a distinctive shape of optimal mutation rate control function. This function has a mutation rate less that a third of 1/length at a Hamming dis- tance of one from the optimum and beyond. This surprising result for a simple, universally monotonic single-peaked fit- ness landscape highlights the need for further research using models such as this. Future work will therefore explore how this control function may vary, for instance with population size and alternative selection mechanisms common in Artifi- cial Life models.
    Original languageEnglish
    Title of host publicationProceedings of the European Conference on Artificial Life 2015
    Place of PublicationCambridge
    PublisherMassachusetts Institute of Technology
    Pages640-647
    Number of pages8
    Publication statusPublished - Jul 2015
    EventEuropean Conference on Artificial Life - York
    Duration: 20 Jul 201524 Jul 2015

    Conference

    ConferenceEuropean Conference on Artificial Life
    CityYork
    Period20/07/1524/07/15

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