PRINTS and its automatic supplement, prePRINTS

T. K. Attwood; P. Bradley; D. R. Flower; A. Gaulton; N. Maudling; A. L. Mitchell; G. Moulton; A. Nordle; K. Paine; P. Taylor; A. Uddin; C. Zygouri

doi:10.1093/nar/gkg030

PRINTS and its automatic supplement, prePRINTS

T. K. Attwood, P. Bradley, D. R. Flower, A. Gaulton, N. Maudling, A. L. Mitchell, G. Moulton, A. Nordle, K. Paine, P. Taylor, A. Uddin, C. Zygouri

Bio-Health Informatics

Research output: Contribution to journal › Article › peer-review

Abstract

The PRINTS database houses a collection of protein fingerprints. These may be used to assign uncharacterised sequences to known families and hence to infer tentative functions. The September 2002 release (version 36.0) includes 1800 fingerprints, encoding ∼11 000 motifs, covering a range of globular and membrane proteins, modular polypeptides and so on. In addition to its continued steady growth, we report here the development of an automatic supplement, prePRINTS, designed to increase the coverage of the resource and reduce some of the manual burdens inherent in its maintenance. The databases are accessible for interrogation and searching at http://www.bioinf.man.ac.uk/ dbbrowser/PRINTS/.

Original language	English
Pages (from-to)	400-402
Number of pages	2
Journal	Nucleic acids research.
Volume	31
Issue number	1
DOIs	https://doi.org/10.1093/nar/gkg030
Publication status	Published - 1 Jan 2003

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10.1093/nar/gkg030

PRINTS and InterPro – online resources that facilitate discovery of pharmaceutical and commercially relevant information in proteomic and genomic data-sets
Attwood, T. (Participant), (Participant), (Participant), Croning , M. (Participant), Scordis, P. (Participant), Bradley, P. (Participant), Uddin, A. (Participant), Selley, J. (Participant), (Participant), Moulton , G. (Participant), (Participant) & (Participant)
Impact: Economic, Health and wellbeing, Technological

Cite this

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title = "PRINTS and its automatic supplement, prePRINTS",

abstract = "The PRINTS database houses a collection of protein fingerprints. These may be used to assign uncharacterised sequences to known families and hence to infer tentative functions. The September 2002 release (version 36.0) includes 1800 fingerprints, encoding ∼11 000 motifs, covering a range of globular and membrane proteins, modular polypeptides and so on. In addition to its continued steady growth, we report here the development of an automatic supplement, prePRINTS, designed to increase the coverage of the resource and reduce some of the manual burdens inherent in its maintenance. The databases are accessible for interrogation and searching at http://www.bioinf.man.ac.uk/ dbbrowser/PRINTS/.",

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T1 - PRINTS and its automatic supplement, prePRINTS

AU - Attwood, T. K.

AU - Bradley, P.

AU - Flower, D. R.

AU - Gaulton, A.

AU - Maudling, N.

AU - Mitchell, A. L.

AU - Moulton, G.

AU - Nordle, A.

AU - Paine, K.

AU - Taylor, P.

AU - Uddin, A.

AU - Zygouri, C.

PY - 2003/1/1

Y1 - 2003/1/1

N2 - The PRINTS database houses a collection of protein fingerprints. These may be used to assign uncharacterised sequences to known families and hence to infer tentative functions. The September 2002 release (version 36.0) includes 1800 fingerprints, encoding ∼11 000 motifs, covering a range of globular and membrane proteins, modular polypeptides and so on. In addition to its continued steady growth, we report here the development of an automatic supplement, prePRINTS, designed to increase the coverage of the resource and reduce some of the manual burdens inherent in its maintenance. The databases are accessible for interrogation and searching at http://www.bioinf.man.ac.uk/ dbbrowser/PRINTS/.

AB - The PRINTS database houses a collection of protein fingerprints. These may be used to assign uncharacterised sequences to known families and hence to infer tentative functions. The September 2002 release (version 36.0) includes 1800 fingerprints, encoding ∼11 000 motifs, covering a range of globular and membrane proteins, modular polypeptides and so on. In addition to its continued steady growth, we report here the development of an automatic supplement, prePRINTS, designed to increase the coverage of the resource and reduce some of the manual burdens inherent in its maintenance. The databases are accessible for interrogation and searching at http://www.bioinf.man.ac.uk/ dbbrowser/PRINTS/.

U2 - 10.1093/nar/gkg030

DO - 10.1093/nar/gkg030

M3 - Article

C2 - 12520033

SN - 1362-4962

VL - 31

SP - 400

EP - 402

JO - Nucleic acids research.

JF - Nucleic acids research.

IS - 1

ER -

PRINTS and its automatic supplement, prePRINTS

Abstract

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Impacts

PRINTS and InterPro – online resources that facilitate discovery of pharmaceutical and commercially relevant information in proteomic and genomic data-sets

Cite this