PRINTS-S: The database formerly known as PRINTS

Jane Gilsenan; T. K. Attwood; M. D R Croning; D. R. Flower; A. P. Lewis; J. E. Mabey; P. Scordis; J. N. Selley; W. Wright

doi:10.1093/nar/28.1.225

PRINTS-S: The database formerly known as PRINTS

Jane Gilsenan, T. K. Attwood, M. D R Croning, D. R. Flower, A. P. Lewis, J. E. Mabey, P. Scordis, J. N. Selley, W. Wright

Research output: Contribution to journal › Article › peer-review

Abstract

The PRINTS database houses a collection of protein family fingerprints. These are groups of motifs that together are diagnostically more potent than single motifs by virtue of the biological context afforded by matching motif neighbours. Around 1200 fingerprints have now been created and stored in the database. The September 1999 release (version 24.0) encodes ~ 7200 motifs, covering a range of globular and membrane proteins, modular polypeptides and so on. In addition to its continued steady growth, we report here several major changes to the resource, including the design of an automated strategy for database maintenance, and implementation of an object-relational schema for more efficient data management. The database is accessible for BLAST, fingerprint and text searches at http://www.bioinf. man.ac.uk/dbbrowser/PRINTS/.

Original language	English
Pages (from-to)	225-227
Number of pages	2
Journal	Nucleic acids research.
Volume	28
Issue number	1
DOIs	https://doi.org/10.1093/nar/28.1.225
Publication status	Published - 1 Jan 2000

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10.1093/nar/28.1.225

PRINTS and InterPro – online resources that facilitate discovery of pharmaceutical and commercially relevant information in proteomic and genomic data-sets
Attwood, T. (Participant), (Participant), (Participant), Croning , M. (Participant), Scordis, P. (Participant), Bradley, P. (Participant), Uddin, A. (Participant), Selley, J. (Participant), (Participant), Moulton , G. (Participant), (Participant) & (Participant)
Impact: Economic, Health and wellbeing, Technological

Cite this

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title = "PRINTS-S: The database formerly known as PRINTS",

abstract = "The PRINTS database houses a collection of protein family fingerprints. These are groups of motifs that together are diagnostically more potent than single motifs by virtue of the biological context afforded by matching motif neighbours. Around 1200 fingerprints have now been created and stored in the database. The September 1999 release (version 24.0) encodes ~ 7200 motifs, covering a range of globular and membrane proteins, modular polypeptides and so on. In addition to its continued steady growth, we report here several major changes to the resource, including the design of an automated strategy for database maintenance, and implementation of an object-relational schema for more efficient data management. The database is accessible for BLAST, fingerprint and text searches at http://www.bioinf. man.ac.uk/dbbrowser/PRINTS/.",

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doi = "10.1093/nar/28.1.225",

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AU - Gilsenan, Jane

AU - Attwood, T. K.

AU - Croning, M. D R

AU - Flower, D. R.

AU - Lewis, A. P.

AU - Mabey, J. E.

AU - Scordis, P.

AU - Selley, J. N.

AU - Wright, W.

PY - 2000/1/1

Y1 - 2000/1/1

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DO - 10.1093/nar/28.1.225

M3 - Article

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SP - 225

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JO - Nucleic acids research.

JF - Nucleic acids research.

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PRINTS-S: The database formerly known as PRINTS

Abstract

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Impacts

PRINTS and InterPro – online resources that facilitate discovery of pharmaceutical and commercially relevant information in proteomic and genomic data-sets

Cite this