Projects per year
available in the RankProd Bioconductor package for several years. However, several recent advances in the understanding of the statistical foundations of the method have made a complete refactoring of the existing package desirable.
Results: We implemented a completely refactored version of the RankProd package, which provides a more principled implementation of the statistics for unpaired datasets. Moreover, the permutation-based p-value estimation methods have been replaced by exact methods, providing faster and more accurate results.
Research Beacons, Institutes and Platforms
- Manchester Institute of Biotechnology
FingerprintDive into the research topics of 'RankProd 2.0: a refactored Bioconductor package for detecting differentially expressed features in molecular profiling datasets'. Together they form a unique fingerprint.
- 1 Finished
Scrutton, N., Azapagic, A., Balmer, A., Barran, P., Breitling, R., Delneri, D., Dixon, N., Faulon, J., Flitsch, S., Goble, C., Goodacre, R., Hay, S., Kell, D., Leys, D., Lloyd, J., Lockyer, N., Martin, P., Micklefield, J., Munro, A., Pedrosa Mendes, P., Randles, S., Salehi Yazdi, F., Shapira, P., Takano, E., Turner, N. & Winterburn, J.
14/11/14 → 13/05/20