TY - GEN
T1 - Sensitivity analysis of mesh warping and subsampling strategies for generating large scale electrophysiological simulation data
AU - Hoogendoorn, Corné
AU - Pashaei, Ali
AU - Sebastian, Rafael
AU - Sukno, Federico M.
AU - Cámara, Oscar
AU - Frangi, Alejandro F.
PY - 2011
Y1 - 2011
N2 - The analysis of large-scale simulation data from virtual populations can be effective to gain computational insight into disease mechanisms and treatment strategies, which can serve for generating hypotheses for and focusing subsequent clinical trials. This can be instrumental in shortening the critical path in medical product development and more cost-effective clinical trials. A previously published pipeline established point correspondence among volumetric meshes to enable meaningful statistics on cardiac electrophysiological simulations on the anatomical distribution of a large-scale virtual population. Thin Plate Splines (TPS), derived from surface deformations, were used to warp a template volumetric mesh, removing the costly operation of repeated volumetric meshing from the pipeline, but potentially at the cost of the volumetric mesh quality. In this work we compare (1) the influence of using TPS versus volumetric meshing of deformed surface meshes, and (2) the influence of surface mesh subsampling prior to the TPS computation. Our results suggest that warping of a template volumetric mesh introduces errors in electrophysiological simulation results of around 4 ms, while having computational times per mesh on the order of seconds, at surface subsampling rates of up to 80%.
AB - The analysis of large-scale simulation data from virtual populations can be effective to gain computational insight into disease mechanisms and treatment strategies, which can serve for generating hypotheses for and focusing subsequent clinical trials. This can be instrumental in shortening the critical path in medical product development and more cost-effective clinical trials. A previously published pipeline established point correspondence among volumetric meshes to enable meaningful statistics on cardiac electrophysiological simulations on the anatomical distribution of a large-scale virtual population. Thin Plate Splines (TPS), derived from surface deformations, were used to warp a template volumetric mesh, removing the costly operation of repeated volumetric meshing from the pipeline, but potentially at the cost of the volumetric mesh quality. In this work we compare (1) the influence of using TPS versus volumetric meshing of deformed surface meshes, and (2) the influence of surface mesh subsampling prior to the TPS computation. Our results suggest that warping of a template volumetric mesh introduces errors in electrophysiological simulation results of around 4 ms, while having computational times per mesh on the order of seconds, at surface subsampling rates of up to 80%.
UR - http://www.scopus.com/inward/record.url?scp=79957635113&partnerID=8YFLogxK
U2 - 10.1007/978-3-642-21028-0_53
DO - 10.1007/978-3-642-21028-0_53
M3 - Conference contribution
AN - SCOPUS:79957635113
SN - 9783642210273
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 418
EP - 426
BT - Functional Imaging and Modeling of the Heart - 6th International Conference, FIMH 2011, Proceedings
T2 - 6th International Conference on Functional Imaging and Modeling of the Heart, FIMH 2011
Y2 - 25 May 2011 through 27 May 2011
ER -