ServiceMap: Providing map and GPS assistance to service composition in bioinformatics

Wei Tan; Jia Zhang; Ravi Madduri; Ian Foster; David De Roure; Carole Goble

doi:10.1109/SCC.2011.122

ServiceMap: Providing map and GPS assistance to service composition in bioinformatics

Wei Tan, Jia Zhang, Ravi Madduri, Ian Foster, David De Roure, Carole Goble

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

Abstract

The wide use of Web services and scientific workflows has enabled bioinformaticians to reuse experimental resources and streamline data processing. This paper presents a follow-up work of our network analysis on the myExperiment, an online scientific workflow repository. The motivation comes from two common questions raised by bio-scientists: 1) Given the services that I plan to use, are there other services usually used together with them? and 2) Given two or more services I plan to use together, is there an operation chain to connect them based on others' past usage? Aiming to provide a system-level GPS-like support to answer the two questions, we present ServiceMap, a network model established to study the best practice of service use. Two approaches are proposed over the ServiceMap: association rule mining and relation-aware, cross-workflow searching. Both approaches were validated using the real-life data obtained from the myExperiment repository. © 2011 IEEE.

Original language	English
Title of host publication	Proceedings - 2011 IEEE International Conference on Services Computing, SCC 2011\|Proc. - IEEE Int. Conf. Serv. Comput., SCC
Publisher	IEEE
Pages	632-639
Number of pages	7
ISBN (Print)	9780769544625
DOIs	https://doi.org/10.1109/SCC.2011.122
Publication status	Published - 2011
Event	2011 IEEE International Conference on Services Computing, SCC 2011 - Washington, DC Duration: 1 Jul 2011 → …

Conference

Conference	2011 IEEE International Conference on Services Computing, SCC 2011
City	Washington, DC
Period	1/07/11 → …

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10.1109/SCC.2011.122

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@inproceedings{e1570ec585da49418892c54d5369f1cd,

title = "ServiceMap: Providing map and GPS assistance to service composition in bioinformatics",

abstract = "The wide use of Web services and scientific workflows has enabled bioinformaticians to reuse experimental resources and streamline data processing. This paper presents a follow-up work of our network analysis on the myExperiment, an online scientific workflow repository. The motivation comes from two common questions raised by bio-scientists: 1) Given the services that I plan to use, are there other services usually used together with them? and 2) Given two or more services I plan to use together, is there an operation chain to connect them based on others' past usage? Aiming to provide a system-level GPS-like support to answer the two questions, we present ServiceMap, a network model established to study the best practice of service use. Two approaches are proposed over the ServiceMap: association rule mining and relation-aware, cross-workflow searching. Both approaches were validated using the real-life data obtained from the myExperiment repository. {\textcopyright} 2011 IEEE.",

author = "Wei Tan and Jia Zhang and Ravi Madduri and Ian Foster and {De Roure}, David and Carole Goble",

year = "2011",

doi = "10.1109/SCC.2011.122",

language = "English",

isbn = "9780769544625",

pages = "632--639",

booktitle = "Proceedings - 2011 IEEE International Conference on Services Computing, SCC 2011|Proc. - IEEE Int. Conf. Serv. Comput., SCC",

publisher = "IEEE",

address = "United States",

note = "2011 IEEE International Conference on Services Computing, SCC 2011 ; Conference date: 01-07-2011",

}

Tan, W, Zhang, J, Madduri, R, Foster, I, De Roure, D & Goble, C 2011, ServiceMap: Providing map and GPS assistance to service composition in bioinformatics. in Proceedings - 2011 IEEE International Conference on Services Computing, SCC 2011|Proc. - IEEE Int. Conf. Serv. Comput., SCC. IEEE, pp. 632-639, 2011 IEEE International Conference on Services Computing, SCC 2011, Washington, DC, 1/07/11. https://doi.org/10.1109/SCC.2011.122

ServiceMap: Providing map and GPS assistance to service composition in bioinformatics. / Tan, Wei; Zhang, Jia; Madduri, Ravi et al.
Proceedings - 2011 IEEE International Conference on Services Computing, SCC 2011|Proc. - IEEE Int. Conf. Serv. Comput., SCC. IEEE, 2011. p. 632-639.

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - ServiceMap: Providing map and GPS assistance to service composition in bioinformatics

AU - Tan, Wei

AU - Zhang, Jia

AU - Madduri, Ravi

AU - Foster, Ian

AU - De Roure, David

AU - Goble, Carole

PY - 2011

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N2 - The wide use of Web services and scientific workflows has enabled bioinformaticians to reuse experimental resources and streamline data processing. This paper presents a follow-up work of our network analysis on the myExperiment, an online scientific workflow repository. The motivation comes from two common questions raised by bio-scientists: 1) Given the services that I plan to use, are there other services usually used together with them? and 2) Given two or more services I plan to use together, is there an operation chain to connect them based on others' past usage? Aiming to provide a system-level GPS-like support to answer the two questions, we present ServiceMap, a network model established to study the best practice of service use. Two approaches are proposed over the ServiceMap: association rule mining and relation-aware, cross-workflow searching. Both approaches were validated using the real-life data obtained from the myExperiment repository. © 2011 IEEE.

AB - The wide use of Web services and scientific workflows has enabled bioinformaticians to reuse experimental resources and streamline data processing. This paper presents a follow-up work of our network analysis on the myExperiment, an online scientific workflow repository. The motivation comes from two common questions raised by bio-scientists: 1) Given the services that I plan to use, are there other services usually used together with them? and 2) Given two or more services I plan to use together, is there an operation chain to connect them based on others' past usage? Aiming to provide a system-level GPS-like support to answer the two questions, we present ServiceMap, a network model established to study the best practice of service use. Two approaches are proposed over the ServiceMap: association rule mining and relation-aware, cross-workflow searching. Both approaches were validated using the real-life data obtained from the myExperiment repository. © 2011 IEEE.

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M3 - Conference contribution

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BT - Proceedings - 2011 IEEE International Conference on Services Computing, SCC 2011|Proc. - IEEE Int. Conf. Serv. Comput., SCC

PB - IEEE

T2 - 2011 IEEE International Conference on Services Computing, SCC 2011

Y2 - 1 July 2011

ER -

ServiceMap: Providing map and GPS assistance to service composition in bioinformatics

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