Speedygenes: Exploiting an improved gene synthesis method for the efficient production of synthetic protein libraries for directed evolution

Andrew Currin, Neil Swainston, Philip J. Day, Douglas B. Kell

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

Abstract

Gene synthesis is a fundamental technology underpinning much research in the life sciences. In particular, synthetic biology and biotechnology utilize gene synthesis to assemble any desired DNA sequence, which can then be incorporated into novel parts and pathways. Here, we describe SpeedyGenes, a gene synthesis method that can assemble DNA sequences with greater fidelity (fewer errors) than existing methods, but that can also be used to encode extensive, statistically designed sequence variation at any position in the sequence to create diverse (but accurate) variant libraries. We summarize the integrated use of GeneGenie to design DNA and oligonucleotide sequences, followed by the procedure for assembling these accurately and efficiently using SpeedyGenes.

Original languageEnglish
Title of host publicationSynthetic DNA
Subtitle of host publicationMethods and Protocols
EditorsRandall A. Hughes
Place of PublicationNew York
PublisherHumana Press, Inc
Pages63-78
Number of pages16
ISBN (Electronic)9781493963430
ISBN (Print)9781493963416
DOIs
Publication statusPublished - 2017

Publication series

NameMethods in Molecular Biology
Volume1472
ISSN (Print)1064-3745

Keywords

  • Directed evolution
  • Error correction
  • Gene synthesis
  • Protein libraries
  • Synthetic biology

Research Beacons, Institutes and Platforms

  • Manchester Institute of Biotechnology

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