Sulfoxide synthase versus cysteine dioxygenase reactivity in a non-heme iron enzyme

Abayomi Faponle, Florian P. Seebeck, Samuel De Visser

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    Abstract

    The sulfoxide synthase EgtB represents a unique family of nonheme iron enzymes that catalyze the formation of a C–S bond between N--trimethyl histidine and -glutamyl cysteine, which is the key step in the biosynthesis of ergothioneine an important amino acid related to aging. A controversy has arisen regarding its catalytic mechanism related to the function of the active site Tyr377 residue. The biosynthesis of ergothioneine in EgtB shows structural similarities to cysteine dioxygenase that transfers two oxygen atoms to the thiolate group of cysteine. The question; therefore, is how EgtB enzymes catalyze the C‒S bond formation reaction, while preventing a dioxygenation of its cysteinate substrate. In this work we present a quantum mechanics/molecular mechanics study into the mechanism of sulfoxide synthase enzymes as compared to cysteine dioxygenase and present pathways for both reaction channels in EgtB. We show that EgtB contains a conserved tyrosine residue that reacts via proton-coupled-electron-transfer with the iron(III)-superoxo species and creates an iron(III)-hydroperoxo intermediate and thereby prevents the possible thiolate dioxygenation side-reaction. The nucleophilic C‒S bond formation step happens subsequently concomitant to relay of the proton of the iron(II)-hydroperoxo back to Tyr377. This is the rate determining step in the reaction cycle and is followed by hydrogen atom transfer from the CE1‒H group of trimethyl histidine substrate to iron(II)-superoxo. In the final step a quick and almost barrierless sulfoxidation leads to the sulfoxide product complexes. The work highlights a unique machinery and active site set-up that leads to the formation of a sulfoxide synthase reaction.
    Original languageEnglish
    JournalJournal of the American Chemical Society
    Early online date11 Jun 2017
    DOIs
    Publication statusPublished - 2017

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