The structural intricacies by which nature's water oxidising complex (WOC) catalyses the vital water oxidation and oxygen formation reactions is still largely unknown. This thesis provides an in-depth computational analysis of the key S2 and S3 states of this catalytic cycle. The S2 X-band EPR spectrum shows a S = 1/2 multi-line signal and a broad S = 5/2 signal at g = 4.1 previously attributed to an open and closed cubane respectively. In Chapter 4 BS-DFT calculations found that an open cubane form of the WOC alone transitions from a low spin (LS), S = 1/2, to a high spin (HS), S = 5/2, form on protonation of the bridging O4 oxo and is therefore responsible for both EPR signals. A key intermediate between the S2 and S3 states is a deprotonated HS form, previously assigned as S = 5/2 by EPR. Chapter 5 provides a thorough reassessment of this spin-state. Here, BS-DFT calculations on the S2 HS form with W1 deprotonated along with EPR spectral simulations proved that this signal is more accurately described by an S = 7/2 spin state, providing further evidence for O4 protonation in S2. Structural elucidations of the S3 state have confirmed the insertion of a new oxygen, O6, to the WOC but disagreed in its location, with observed O5-O6 bond distances ranging from 1.5 to 2.1 Ã. An oxo-hydroxo form (O-O >2.4 Ã) has previously been assigned through agreement with the observed S = 3 EPR signal and 55Mn hyperfine coupling (hfc). In Chapter 6, BS-DFT analysis of a peroxo form (1.5 Ã) shows strong agreement with structural determinations of the S3 state and yields the correct S = 3 spin state, whilst the observed hfcs agreed with an oxo-hydroxo. In Chapter 7, a proposed equilibrium between a peroxo and an oxo-oxo form is examined BS-DFT and intrinsic bond orbital analysis. This study showed in detail the electronic-level movements that facilitate the dynamic O-O bond forming equilibrium in the S3 state, allowing rapid evolution of O2 in the transient S4 state. The new insights provided within this thesis have led to a reassessment of the proposed mechanism by which nature catalyses this vital reaction.
Date of Award | 31 Dec 2020 |
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Original language | English |
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Awarding Institution | - The University of Manchester
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Supervisor | Robin Pritchard (Supervisor), Michael Anderson (Supervisor) & Patrick O'Malley (Supervisor) |
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- Broken symmetry
- IBO
- Water Oxidation
- Photosynthesis
- DFT
- EPR
NEW INSIGHTS INTO NATURE'S WATER OXIDISING COMPLEX
Corry, T. (Author). 31 Dec 2020
Student thesis: Phd